| Protein: | gi|20197088, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 649 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20197088, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
487.0 | [0..126] | [642..439] |
|
Region A: Residues: [1-176] |
1 11 21 31 41 51
| | | | | |
1 MDLFGEFRKV EIDGKPFLVY HKVMKPLPQI HTPNSSDEET TIEKPLSIQN EETSSDEETI 60
61 DSGDNLPLPL LFACPIVRLT STVIIDNITL QDDQGKSVEH FFNLKTSPFH GDNTSVDHDP 120
121 VLPLFWCNNK EADPENDCVI CRAEKVGTDY YYCVECDMRY HKECVESPLR INYPSH
|
| Detection Method: |  |
| Confidence: | 1.29 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0196698141692984 | bayes_pls_golite062009 |
|
Region A: Residues: [177-231] |
1 11 21 31 41 51
| | | | | |
1 ANHSFQLYSS KKRFKYCIMC RKKVNGLVYY CALCDMYMHT LCAQAVIPFF IDQPK
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0980674097362609 | bayes_pls_golite062009 |
|
Region A: Residues: [232-286] |
1 11 21 31 41 51
| | | | | |
1 RHAHILTLFP RQASLTCNIC GVLDELHFTY VCPICDFVTH ADCIYIPQTI RISRH
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1tbnA |
| Description: | NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0980674097362609 | bayes_pls_golite062009 |
|
Region A: Residues: [287-418] |
1 11 21 31 41 51
| | | | | |
1 HHCISFTSSL LKGKWSCGVC RQEVDRKYGA YTCNACNGYT VHTRCALRND IWDGKELEGV 60
61 QEDEEVEPPF KRISDGIILH FSHGCQMELE TSGVHVGGNK FCQACALPIN EENFYICVEC 120
121 DFILHETCAE AP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [419-508] |
1 11 21 31 41 51
| | | | | |
1 QKKFHPLHPH ALQQKVVHEN DLFLCDACDR LCNGFGYECT FEDCDYILDV VCASASEPFN 60
61 YQGHQHPLFL ALRPNVKPMC HICKSTKENQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [509-649] |
1 11 21 31 41 51
| | | | | |
1 VLNCIEGDFI ICFECATLPY VIRYKHDDHY LTLCHGEEAS DSDWCELCEG KLSTGGEKGF 60
61 YKCDDCCTTL HINCLLGPNP FLKPGQTFTL GRNEFLVIRN NSPRPICGTC NMRRPYPVMF 120
121 FWESDHRSIT KPKEKSSKTL V
|
| Detection Method: | |
| Confidence: | 2.1 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0196698141692984 | bayes_pls_golite062009 |
