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View Structure Prediction Details

Protein: P4KG5_ARATH
Organism: Arabidopsis thaliana
Length: 630 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P4KG5_ARATH.

Description E-value Query
Range
Subject
Range
P4KG7_ARATH - Phosphatidylinositol 4-kinase gamma 7 OS=Arabidopsis thaliana GN=PI4KG7 PE=1 SV=2
747.0 [0..1] [630..1]
gi|222635400, gi... - gi|55297407|dbj|BAD69260.1| phosphatidylinositol 3- and 4-kinase family-like [Oryza sativa Japonica ...
734.0 [0..1] [630..51]
gi|92894700 - gi|92894700|gb|ABE92357.1| Phosphatidylinositol 3- and 4-kinase, catalytic [Medicago truncatula]
734.0 [0..1] [630..1]
gi|90657540 - gi|90657540|gb|ABD96840.1| hypothetical protein [Cleome spinosa]
654.0 [0..1] [630..13]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKLDSPIK TQMAVALVKS PLNGEFREFN KVGMKTPVGR RRVFVQTETG CVLGLELDRS  60
   61 DNAHTVKRKL QVALNFPIEE SSLTFGDLVL KNDLTAVRSD SPLLLTRNNF HRSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.39794
Match: 2ojrA
Description: No description for 2ojrA was found.

Predicted Domain #2
Region A:
Residues: [115-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STPCLSPMRA DLQQRRDESS PIEILGNSVS FSFVRQMAKD ITKAVKKGID PVAVNSGLGG  60
   61 AYYFKNSRGE SVAIVKPTDE EPYAPNNPKG FVGKALGQPG LKRSVRVGET GYREVAAYLL 120
  121 DKEHFANVPP TALVKITHSI F

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.380 N/A N/A d.93.1 SH2 domain
View Download 0.346 N/A N/A b.60.1 Lipocalins
View Download 0.346 N/A N/A b.60.1 Lipocalins
View Download 0.328 N/A N/A c.47.1 Thioredoxin-like
View Download 0.296 N/A N/A b.18.1 Galactose-binding domain-like
View Download 0.288 N/A N/A b.60.1 Lipocalins
View Download 0.288 N/A N/A b.60.1 Lipocalins
View Download 0.272 N/A N/A d.110.4 SNARE-like
View Download 0.250 N/A N/A b.60.1 Lipocalins
View Download 0.228 N/A N/A d.110.4 SNARE-like

Predicted Domain #3
Region A:
Residues: [256-458]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVNDGVKASK PMEKMLVSKI ASLQQFIPHD YDASEHGTSN FPVSAVHRIG ILDIRILNTD  60
   61 RHSGNLLVKK LDGDGMFGQV ELVPIDHGLC LPETLEDPYF EWIHWPQASI PFSEDELKYI 120
  121 ANLDPLGDCE MLRRELPMVR EASLRVLVLC TIFLKEAAAN GLCLAEIGEM MTREVRPGDE 180
  181 EPSEIEVVCL EAMSLIGEKD AES

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [459-630]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRSDLGNDIE FQFDIDCEEV TDCTKKLALP LGLTFGNARG QLSKVEETTE DGEEEEEEDR  60
   61 EEEENDRADL EKMPTIKLSM SLKSTLLGEK SQKYQKHPGA RVESAYASSA HRSADEQIPS 120
  121 STSFVKLSDM SEEEWTIFLE KYQELLYPAI EKRKSITLGQ KQRQRLGTSC QF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle