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View Structure Prediction Details

Protein: AGUA_ARATH
Organism: Arabidopsis thaliana
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGUA_ARATH.

Description E-value Query
Range
Subject
Range
gi|26452202, gi|... - gi|28950963|gb|AAO63405.1| At5g08170 [Arabidopsis thaliana], gi|26452202|dbj|BAC43189.1| unknown pro...
571.0 [0..1] [383..1]

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Predicted Domain #1
Region A:
Residues: [1-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEESRESPAE HGYYMPAEWD SHAQTWIGWP ERQDNWRHNA LPAQRVFADV AKAISKFEPV  60
   61 TVCASPAQWE NARKQLPEDI RVVEMSMNDS WFRDSGPTFI VRKRPVKLSS LNRNIAGIDW 120
  121 NFNAWGGAND GCYNDWSHDL LVSRKILALE RIPRFQHSMI LEGGSIHVDG EGTCLVTEEC 180
  181 LLNKNRNPHM SKEQIEEELK KYLGVQSFIW LPRGLYGDED TNGHIDNMCC FARPGVVLLS 240
  241 WTDDETDPQY ERSVEALSVL SNSIDARGRK IQVIKLYIPE PLYMTEEESS GITQDGEAIP 300
  301 RLAGTRLAAS YVNFYIANGG IIAPQFGDPI RDKEAIRVLS DTFPHHSVVG IENAREIVLA 360
  361 GGNIHCITQQ QPAEPTSVAE NGH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 163.0
Match: 1vkpA
Description: X-RAY STRUCTURE OF GENE PRODUCT FROM ARABIDOPSIS THALIANA AT5G08170, AGMATINE IMINOHYDROLASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines 1.44778336549668 bayes_pls_golite062009
hydrolase activity 0.900211973216652 bayes_pls_golite062009
catalytic activity 0.889920589881492 bayes_pls_golite062009
agmatine deiminase activity 0.773477244547336 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 0.410513057853472 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle