| Protein: | gi|42573257, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 356 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42573257, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
269.0 | [0..6] | [347..556] |
|
|
257.0 | [0..4] | [354..3] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MVSHEENTSI VEWFLGPHPY TYPPYGIEMI HEDDEVAVAH HHHHHQSGEY YREYEDHRSS 60
61 DVDNDEIIAR TLQDDFLQLE IAESN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.563 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.547 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.523 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.519 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.512 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.491 | N/A | N/A | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.491 | N/A | N/A | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.416 | N/A | N/A | a.21.1 | HMG-box |
| View | Download | 0.414 | N/A | N/A | d.15.2 | CAD & PB1 domains |
|
Region A: Residues: [86-200] |
1 11 21 31 41 51
| | | | | |
1 DYSHQNQQQQ HQQEGYTNNY SNNNNGYAWN DQSPAVDYSS EWIGNDNDQD GRSDDSVNVF 60
61 SCSSPSDTDE YVYSWESDQC DADGEFGRRL NQMVPIPYIP KINGEIPPEE EAVSD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [201-356] |
1 11 21 31 41 51
| | | | | |
1 HERLRNRLEM FDFTEVKVPG DGNCQFRALA DQLYKTADRH KHVRRQIVKQ LKSRPDSYQG 60
61 YVPMDFSDYL RKMSRSGEWG DHVTLQAAAD AYRVKIVVLT SFKDTCYIEI LPTSQESKGV 120
121 IFLSFWAEVH YNAIYLNRDT SETELQRKRK WWRFGN
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 1tffA |
| Description: | Structure of Otubain-2 |
Matching Structure (courtesy of the PDB): |
|
