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Protein Overview: gi|18414504, gi|...

General Information:
Name(s) found: gi|90093272 [NCBI NR]
gi|62320580 [NCBI NR]
gi|21592575 [NCBI NR]
gi|186520008 [NCBI NR]
gi|18414504 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|90093272|gb|ABD85149.1| At5g04250 [Arabidopsis thaliana] [NCBI NR]
  • gi|62320580|dbj|BAD95211.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21592575|gb|AAM64524.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|186520008|ref|NP_001119168.1| OTU-like cysteine protease family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18414504|ref|NP_568136.1| OTU-like cysteine protease family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 345 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: cysteine-type peptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYEPDPDAL RWGLHDLEVC TLTNAGSCSS VTRYESGGGG TQGYVREGYN QPVTGYVDND  60
   61 AVIAQFYQDE LSRVARAEAS GINSLSPTSV VAQDWPHPHQ GQENQGEAID ITQESDILHN 120
  121 HNGNMEDKNV ARIRFEGGQS SPSRDDDSVC SVEIEEESWS EVGKRLNQMI PIAHVPKING 180
  181 ELPSEDEQIS DHERLFQRLQ LYGLVENKIE GDGNCQFRSL SDQLYRSPEH HNFVREQVVN 240
  241 QLAYNREIYE GYVPMAYNDY LKAMKRNGEW GDHVTLQAAA DLFGVRMFVI TSFKDTCYIE 300
  301 ILPHFQKSNR LICLSFWAEV HYNSIYPEGE LPIPEGKKKK KYWVF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] deduced N/A No confident structure predictions are available.
    2 View Details [100..345] PSI-BLAST 14.522879 Structure of Otubain-2


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle