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View Structure Prediction Details

Protein: DEXH4_ARATH
Organism: Arabidopsis thaliana
Length: 1417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for DEXH4_ARATH.

Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTKKPQKN KQSKNEIASS LIPNSGHKKP SKAPKLLISP ENEDRLRRLL LNFRRTPSPV  60
   61 TATLSVTQKR KKLNNLYENL SCEGFLDNQI ELVLSSLRDG ATLETALDWL CLNLPSHELP 120
  121 VNFSNGASRF PSTGRSVAVI SKSKKDWNVS AE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [153-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSVQEVKEVP ESEVLVRVKS KRDEEEEDSL SSCQPSQADW IHQYMKRLEE EELESSDDER  60
   61 DKVSGPRSFE VIAKEYCVER YNAIKAKRKG DKSGQSQAGL AICKLKEEMN ALGPSEAILE 120
  121 SEFQRDRQDC EGAREKEVAS SVLDDVHESV NADAFFFQLF 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [313-583]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDLTLDTNPV GSCKSEEQES VVSNDSLDDL DLGDLFDEDV PPYVPSPHEL LELQKKEIMR  60
   61 ELCNEKHLTK LNGIWKKGEA QKIPKALLHQ LCQRSGWIAP KFNKVTGEGR NFSYTTSVMR 120
  121 KSSGFGKSRQ AGGLVTIQLP HQVEDFESIQ DAQNRVAAFA LHKLFSDLPV HFAITEPYAS 180
  181 LVLIWKQEES LGITSREEQR REKFVESLLE ADNFSLTTTS RGIHSALPMV DSCVKENDDL 240
  241 DVVKSNHRAR RNSSMAAECS SLKQKQENKK K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [584-1280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKYKDMLKT RAALPISEVK KDILQKLKEK DVLVVCGETG SGKTTQVPQF ILDDMIDSGH  60
   61 GGYCNIICTQ PRAITVAQRV ADERCEPPPG FDNSVVAYQV RHQNARSDKT RLLFCTTGIL 120
  121 LRKLVGDTTL KDVTHIIVDE VHERSLMGDF LLIILKSLIE KQSWDNALPK LKVILMSATV 180
  181 DAHQFSRYFG QCPIITAQGR THPVTTYFLE DIYERTKYLL ASDSPAALSS DTSITDKLGS 240
  241 VNVPRGKKNL MLAGWGDSYL VSEDSLNTSY DSIKYIASAV VDYDLLEELI CHIDDTCEEG 300
  301 AILVFLPGMS EINMLLNRLA ASYRFRGASG DWLLPLHSSI ASTEQKKVFL RPPKGIRKVI 360
  361 IATNIAETSI TIEDVVYVID SGKHKENRYN PHKKLSSMVE DWVSKANARQ RMGRAGRVKP 420
  421 GHCFSLYTRH RFEKLMRPYQ VPEMLRVPLV ELCLHIKLLG LGQIKPFLSK ALEPPSESAI 480
  481 NSAILLLHKV GALEGDEELT PLGHHLAKLP VDLLIGKMLL YGGIFGCLSP ILSIAAFLSC 540
  541 CKSPFVYAKD EQNVDRVKLA LLSDKLESSS NLNNNDRQSD HLLMVVAYEK WVRILHEQGF 600
  601 KAAESFCESK FLNSSVMRMM RERRVEFGML LADIGLINLP KGKGRRKENF DVWFSDKTQP 660
  661 FNMYSQEPEV VKAILCAGLC PNIAEGLVNR LTKPAEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 2p6rA
Description: No description for 2p6rA was found.

Predicted Domain #5
Region A:
Residues: [1281-1417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TQRYAVWHDG KREVHIHRNS INKNCKAFQY PFIVFLEKLE TKKVVYLQDT TVVSPFSILL  60
   61 FGGSINVHHQ SGSVTIDGWL KLTAPAQTAV LFKELRLTLH SILKDLIRKP EKSGIVHNEV 120
  121 VKSMVHLLIE EGKPQHT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle