| Protein: | gi|18416843, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 1062 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18416843, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
964.0 | [0..1] | [1062..1] |
|
|
875.0 | [0..1] | [1058..6] |
|
|
850.0 | [0..10] | [1060..16] |
|
Region A: Residues: [1-234] |
1 11 21 31 41 51
| | | | | |
1 MASDLSRAGP VERDIEQAII ALKKGAYLLK YGRRGKPKFC PFRLSNDETV LIWFSGNEEK 60
61 HLKLSHVSRI ISGQRTRYPR PEKEYQSFSL IYSERSLDVD KDEAEVWFTG LKALISHCHQ 120
121 RNRRTESRSD GTPSEANSPR TYTRRSSPLH SPFSSNDSLQ KDGSNHLRIH SPFESPPKNG 180
181 LDKAFSDMAL YAVPPKGFYP SDSATISVHS GGSDSMHGHM RGMGMDAFRV SMSS
|
| Detection Method: |  |
| Confidence: | 32.221849 |
| Match: | 1jtdB |
| Description: | beta-lactamase inhibitor protein-II, BLIP-II |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [235-641] |
1 11 21 31 41 51
| | | | | |
1 AVSSSSHGSG HDDGDALGDV FIWGEGIGEG VLGGGNRRVG SSFDIKMDSL LPKALESTIV 60
61 LDVQNIACGG QHAVLVTKQG ESFSWGEESE GRLGHGVDSN IQQPKLIDAL NTTNIELVAC 120
121 GEFHSCAVTL SGDLYTWGKG DFGVLGHGNE VSHWVPKRVN FLLEGIHVSS IACGPYHTAV 180
181 VTSAGQLFTF GDGTFGVLGH GDKKSVFIPR EVDSLKGLRT VRAACGVWHT AAVVEVMVGS 240
241 SSSSNCSSGK LFTWGDGDKG RLGHGNKEPK LVPTCVAALV EPNFCQVACG HSLTVALTTS 300
301 GHVYTMGSPV YGQLGNSHAD GKTPNRVEGK LHKSFVEEIA CGAYHVAVLT SRTEVYTWGK 360
361 GSNGRLGHGD VDDRNSPTLV ESLKDKQVKS IACGTNFTAA VCIHRWA
|
| Detection Method: | |
| Confidence: | 79.0 |
| Match: | 1a12A |
| Description: | Regulator of chromosome condensation RCC1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [642-690] |
1 11 21 31 41 51
| | | | | |
1 SGMDQSMCSG CRQPFSFKRK RHNCYNCGLV FCHSCTSKKS LKACMAPNP
|
| Detection Method: | |
| Confidence: | 4.221849 |
| Match: | 1jocA |
| Description: | Eea1; Eea1 homodimerisation domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [691-766] |
1 11 21 31 41 51
| | | | | |
1 NKPYRVCDKC FNKLKKTMET DPSSHSSLSR RGSINQGSDP IDKDDKFDSR SDGQLARFSL 60
61 MESMRQVDSR HKKNKK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [767-1062] |
1 11 21 31 41 51
| | | | | |
1 YEFNSSRVSP IPSGSSQRGA LNIAKSFNPV FGASKKFFSA SVPGSRIVSR ATSPISRRPS 60
61 PPRSTTPTPT LSGLATPKFV VDDTKRTNDN LSQEVVKLRS QVESLTRKAQ LQEVELERTT 120
121 KQLKEALAIT NEETTRCKAA KEVIKSLTAQ LKDMAERLPV GSARTVKSPP SLNSFGSSPG 180
181 RIDPFNILNQ ANSQESEPNG ITTPMFSNGT MTPAFGNGEA TNEARNEKEW VEQDEPGVYI 240
241 TLTALAGGAR DLKRVRFSRK RFSEIQAEQW WADNRGRVYE QYNVRMVDKA SEDLPR
|
| Detection Method: | |
| Confidence: | 1.29 |
| Match: | 2ch7B |
| Description: | No description for 2ch7B was found. |
