YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|7413588, gi\|1...
Organism:	Arabidopsis thaliana
Length:	283 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7413588, gi|1....

Description	E-value	Query Range	Subject Range
gi\|25363711, gi\|... - gi\|4371291\|gb\|AAD18149.1\| hypothetical protein [Arabidopsis thaliana], gi\|28827662\|gb\|AAO50675.1\| un...	287.0	[0..4]	[273..5]
gi\|92868241 - gi\|92868241\|gb\|ABE78312.1\| conserved hypothetical protein [Medicago truncatula]	131.0	[0..4]	[269..5]
gi\|50932043, gi\|... - gi\|50932043\|ref\|XP_475549.1\| hypothetical protein [Oryza sativa (japonica cultivar-group)], gi\|47900...	57.0	[0..7]	[267..4]

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Predicted Domain #1

Region A:
Residues: [1-147]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMISRRPVSS PGRVEKYPPP FMGFLRSKSN GGSTSRSRSR SRGRSRASPL FVRRNKSAAA  60
   61 VAQEPSSPKV TCMGQVRVNR SKPKIKPESR DNPTRRRCEW LRNASFYNKF AGKIKTMTFW 120
  121 PKWRLCSFSC ACRNLKEKDS PRSQLDH

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [148-283]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTTESVREIK EEIEGEENFE IPKLFVSPAT TPPINALLLT RSRSAPYRSS SLAFRFWEEN  60
   61 NQREVESQQN VRSEKTDSEV PIEKINGFHE PEYVDRDEEE FTKLRFVRQP VLTRSKSEPA 120
  121 RIGEKMMVLL PDEEEG