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View Structure Prediction Details

Protein: gi|9280653, gi|2...
Organism: Arabidopsis thaliana
Length: 740 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|9280653, gi|2....

Predicted Domain #1
Region A:
Residues: [1-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCVNSRHRP FRRKSTTLKE SSEEKRSSRI DSSRRIDDWI QPEDGFDRLS NSGDAKVRLI  60
   61 ESEMFSTSRC HDHQIGKILE NPATVAHMDR VVHDQELRRA SSAVVDSDLD IDPKVVKAKL 120
  121 DRWNSKDSKV RLIESEKLSS SMFSEHHQIE KGVEKPEVEA SVRVVHRELK RGSSIVSPKD 180
  181 AERKQVAAGW PSWLVSVAGE SLVDWAPR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [209-504]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RANTFEKLEK IGQGTYSSVY RARDLLHNKI VALKKVRFDL NDMESVKFMA REIIVMRRLD  60
   61 HPNVLKLEGL ITAPVSSSLY LVFEYMDHDL LGLSSLPGVK FTEPQVKCYM RQLLSGLEHC 120
  121 HSRGVLHRDI KGSNLLIDSK GVLKIADFGL ATFFDPAKSV SLTSHVVTLW YRPPELLLGA 180
  181 SHYGVGVDLW STGCILGELY AGKPILPGKT EVEQLHKIFK LCGSPTENYW RKQKLPSSAG 240
  241 FKTAIPYRRK VSEMFKDFPA SVLSLLETLL SIDPDHRSSA DRALESEYFK TKPFAC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.39794
Match: 1vywA
Description: Structure of CDK2/Cyclin A with PNU-292137
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [505-740]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPSNLPKYPP SKEIDAKMRD EAKRQQPMRA EKQERQDSMT RISHERKFVP PVKANNSLSM  60
   61 TMEKQYKDLR SRNDSFKSFK EERTPHGPVP DYQNMQHNRN NQTGVRISHS GPLMSNRNMA 120
  121 KSTMHVKENA LPRYPPARVN PKMLSGSVSS KTLLERQDQP VTNQRRRDRR AYNRADTMDS 180
  181 RHMTAPIDPS WYNPSDSKIY MSGPLLAQPS RVDQMLEEHD RQLQEFNRQA LKTPQG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle