| Protein: | SWA1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 530 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SWA1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
576.0 | [0..3] | [516..1204] |
|
|
553.0 | [0..3] | [526..1076] |
|
|
549.0 | [0..3] | [518..980] |
|
|
546.0 | [0..6] | [515..641] |
|
|
544.0 | [0..3] | [516..943] |
|
|
541.0 | [0..3] | [516..190] |
|
|
541.0 | [0..2] | [515..599] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MEEELRVRLN DHQVSKVFPV KPKSTAKPVS ESETPESRYW SSFKNHSTPN LVSSVAALAF 60
61 SPVHPHSLAV AHSATVSLFS SQSLSSSRRF SF
|
| Detection Method: |  |
| Confidence: | 80.69897 |
| Match: | 2gnqA |
| Description: | No description for 2gnqA was found. |
|
Region A: Residues: [93-421] |
1 11 21 31 41 51
| | | | | |
1 RDVVSSVCFR SDGALFAACD LSGVVQVFDI KERMALRTLR SHSAPARFVK YPVQDKLHLV 60
61 SGGDDGVVKY WDVAGATVIS DLLGHKDYVR CGDCSPVNDS MLVTGSYDHT VKVWDARVHT 120
121 SNWIAEINHG LPVEDVVYLP SGGLIATAGG NSVKVWDLIG GGKMVCSMES HNKTVTSLRV 180
181 ARMESAESRL VSVALDGYMK VFDYGRAKVT YSMRFPAPLM SLGLSPDGST RVIGGSNGMV 240
241 FAGKKKVRDV VGGQKKSLNL WSLISDVDES RRRALRPTYF RYFQRGQSEK PSKDDYLVKE 300
301 KKGLKLTRHD KLLKKFRHKE ALVSVLEEK
|
| Detection Method: | |
| Confidence: | 48.0 |
| Match: | 1trjA |
| Description: | Homology Model of Yeast RACK1 Protein fitted into 11.7A cryo-EM map of Yeast 80S Ribosome |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [422-530] |
1 11 21 31 41 51
| | | | | |
1 KPANVVAVME ELVARRKLMK CVSNMEEGEL GMLLGFLQRY CTVQRYSGLL MGLTKKVLET 60
61 RAEDIKGKNE FKGLLRNLKR EVNQEIRIQQ SLLEIQGVIA PLMRIAGRS
|
| Detection Method: | |
| Confidence: | 7.958607 |
| Match: | PF09384.1 |
| Description: | No description for PF09384.1 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.952 | N/A | N/A | a.216.1 | Description not found. |
| View | Download | 0.894 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.894 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.886 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.886 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.857 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.856 | N/A | N/A | a.29.9 | Description not found. |
| View | Download | 0.770 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.749 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.741 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.606 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.409 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.360 | N/A | N/A | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
| View | Download | 0.337 | N/A | N/A | a.7.8 | GAT domain |
