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View Structure Prediction Details

Protein: MACP2_ARATH
Organism: Arabidopsis thaliana
Length: 606 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MACP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|218199149 - gi|218199149|gb|EEC81576.1| hypothetical protein OsI_25027 [Oryza sativa Indica Group]
gi|215697301, gi... - gi|50934395|ref|XP_476725.1| unknown protein [Oryza sativa (japonica cultivar-group)], gi|50509956|d...
724.0 [0..1] [598..1]
gi|92870237 - gi|92870237|gb|ABE79564.1| Membrane attack complex component/perforin/complement C9 [Medicago trunca...
717.0 [0..1] [596..1]
NSL1_ARATH - MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana GN=NSL1 PE=2 SV=1
615.0 [0..1] [600..1]

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Predicted Domain #1
Region A:
Residues: [1-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRLPASKA AEVAIGSIGC GYDLAIDLRL KYCKGGSKDS RLLDIKEGDD NCEIVLPGGI  60
   61 SIPNVSKSIK CDKGERMRFR SDILPFQQMA EQFNQELSLA GKIPSGLFNA MFEFSSCWQK 120
  121 DAAYTKNLAF DGVFISLYSV ALDKSQVLLR EHVKQAVPST WDPAALARFI DIYGTHIIVS 180
  181 VKMGGKDVIY AKQQHSSKLQ PEDLQKRLKE VADKRFVEAS VVHNTGSERV QASSKVETKE 240
  241 QRLRFADTSS LGSYANKEDY VFMCKRRGGN DNRNLMHNEW LQTVQMEPDV ISMSFIPITS 300
  301 LLNGVPGSGF LSHAINLYLR YKPPIEELHQ FLEFQL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.522879
Match: 2qqhA
Description: No description for 2qqhA was found.

Predicted Domain #2
Region A:
Residues: [337-513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRQWAPVFSE LPLGPQRKQQ SCASLQFSFF GPKLYVNTTP VDVGKRPITG MRLYLEGRRS  60
   61 NRLAIHLQHL SSLPKIYQLE DDLNRSIRQE SHDRRYYEKV NWKNYSHVCT EPVESDDDLS 120
  121 VVTGAQLHVE SHGFKNVLFL RLCFSRVVGA TLVKNSEWDE AVGFAPKSGL ISTLISH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [514-606]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HFTAAQKPPP RPADVNINSA IYPGGPPVPT QAPKLLKFVD TSEMTRGPQE SPGYWVVSGA  60
   61 RLLVEKGKIS LKVKYSLFTP ILGDEVIEEA YEG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle