| Protein: | gi|39545882, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 360 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39545882, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
249.0 | [0..3] | [344..24] |
|
Region A: Residues: [1-65] |
1 11 21 31 41 51
| | | | | |
1 MTMKWGHSCR RCKQINVVTD HVTRRTRCFG CGLEFKYRPI GDLSPVAEND TVRLPDPTNT 60
61 LLSNT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [66-148] |
1 11 21 31 41 51
| | | | | |
1 DLSIVTTEHK NGSFDDSLSL NLGNSSKPRL DPVSIATAKL MNGSSNDFLS LGTSQNSETI 60
61 TASSDEFLFS DLGHLQKFSF DPL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [149-360] |
1 11 21 31 41 51
| | | | | |
1 SMASTKPNKA LSIVSIEAIS NGLKLPATIK GQANEIFKVV ESYARGKERN VLFAACIYIA 60
61 CRDNDMTRTM REISRFANKA SISDISETVG FIAEKLEINK NWYMSIETAN FIKRFCSIFR 120
121 LDKEAVEAAL EAAESYDYMT NGRRAPVSVA AGIVYVIARL SYEKHLLKGL IEATGVAENT 180
181 IKGTYGDLYP NLPTIVPTWF ANANDLKNLG AP
|
| Detection Method: | |
| Confidence: | 36.39794 |
| Match: | 1aisB |
| Description: | Transcription factor IIB (TFIIB), core domain |
Matching Structure (courtesy of the PDB): |
|
