| Protein: | PUB8_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 374 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB8_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
161.0 | [0..5] | [374..228] |
|
Region A: Residues: [1-374] |
1 11 21 31 41 51
| | | | | |
1 MAFDLPNDFR CPISLEIMSD PVILQSGHTF DRVSIQQWID SGNRTCPITK LPLSETPYLI 60
61 PNHALRSLIL NFAHVSLKES SRPRTQQEHS HSQSQALIST LVSQSSSNAS KLESLTRLVR 120
121 LTKRDSSIRR KVTESGAVRA ALDCVDSCNQ VLQEKSLSLL LNLSLEDDNK VGLVADGVIR 180
181 RIVTVLRVGS PDCKAIAATL LTSLAVVEVN KATIGSYPDA ISALVSLLRV GNDRERKESA 240
241 TALYALCSFP DNRKRVVDCG SVPILVEAAD SGLERAVEVL GLLVKCRGGR EEMSKVSGFV 300
301 EVLVNVLRNG NLKGIQYSLF ILNCLCCCSG EIVDEVKREG VVEICFGFED NESEKIRRNA 360
361 TILVHTLLGI PMSS
|
| Detection Method: |  |
| Confidence: | 38.69897 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.373576425899935 | bayes_pls_golite062009 |
