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View Structure Prediction Details

Protein: gi|12321807, gi|...
Organism: Arabidopsis thaliana
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12321807, gi|....

Description E-value Query
Range
Subject
Range
gi|8778530, gi|2... - gi|8778530|gb|AAF79538.1|AC023673_26 F21D18.12 [Arabidopsis thaliana], pir||F96521 protein F21D18.12...
451.0 [0..64] [323..60]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESRLSLFIM KQTILYLISI PYSDVNNFVG VLRYQTSFKS VKLSCGEGGC GACVVLLSNQ  60
   61 HSRFVTSPDE NSDVVYSFSG YSHASEIVDC YLNGKSPPKT TINPESSKFW WEDPNLYGDC 120
  121 DDLSELRIIE DRLMRTKKHL MDCLEKKEKS YSVSKSDQNP KNNGGSSSSS SSSSSQIASD 180
  181 FGQNPSTSSP FFDHHSYSSL EPSSQVTTCF DQNPIFSVGS 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.02
Match: 1fiqA
Description: Xanthine oxidase, domain 2; Xanthine oxidase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [221-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESSSDQFRYL VNEDAGFVDC LFETEEEKNR MIVPQETQTQ PMFSEEDQSF WENLDVDDVF  60
   61 GLFNDDTNLE VPLQDHSSTN EEDEFMIDIS EYLSEEAMEW PMF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle