| Protein: | SDN4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 322 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SDN4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
262.0 | [0..3] | [320..338] |
|
Region A: Residues: [1-228] |
1 11 21 31 41 51
| | | | | |
1 MDYLQAMRLR EANRLMIAKF KKESPANDSP EQRLVRLTNE NPQYNVDFLF HSYSKDWFVS 60
61 DVGMKMSNVM IPNQMLALDC EMVLCEDGTE GVVRVGAVDR NLKVILDEFV KPHKPVVDYR 120
121 TAITGVTAED VQKATLSLVD IQEKLRPFLS AGAILIDHPI VIDTSLVFKY PNSRKLRRPS 180
181 LNTLCMSVLG YEVQKAGVSH HCVHDAAAAM KLALAVIKKR VDTTITLT
|
| Detection Method: |  |
| Confidence: | 12.69897 |
| Match: | 1zbuA |
| Description: | No description for 1zbuA was found. |
|
Region A: Residues: [229-322] |
1 11 21 31 41 51
| | | | | |
1 KEAEKSRLFL HRIPHHLSSE ELKKDLALKF FPKNFTIDVK PAKTQGGYYC AVVIFGSSVE 60
61 ANQAFENVNG YKETDSSGLP QKLISCSIST FYVR
|
| Detection Method: | |
| Confidence: | 1.06 |
| Match: | 2cq2A |
| Description: | solution structure of RNA binding domain in Hypothetical protein LOC91801 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.787118623292657 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0269483316710413 | bayes_pls_golite062009 |
