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View Structure Prediction Details

Protein: ACBP3_ARATH
Organism: Arabidopsis thaliana
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACBP3_ARATH.

Description E-value Query
Range
Subject
Range
gi|45773894, gi|... - gi|45773894|gb|AAS76751.1| At4g24230 [Arabidopsis thaliana], gi|42600567|gb|AAS21130.1| At4g24230 [A...
457.0 [0..1] [362..1]

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Predicted Domain #1
Region A:
Residues: [1-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA  60
   61 RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN AKICGDREAE SSAAASSENY 120
  121 VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG 180
  181 GDVLVAESEE VRVEKSSNMV EESDAEAENE EKTELTIEED DDWEGIE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [228-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSELEKAFAA AVNLLEESGK AEEIGAEAKM ELFGLHKIAT EGSCREAQPM AVMISARAKW  60
   61 NAWQKLGNMS QEEAMEQYLA LVSKEIPGLT KAGHTVGKMS EMETSVGLPP NSGSLEDPTN 120
  121 LVTTGVDESS KNGIP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.0
Match: 2copA
Description: Solution structure of RSGI RUH-040, an ACBP domain from human cDNA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle