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View Structure Prediction Details

Protein: ACBP3_ARATH
Organism: Arabidopsis thaliana
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACBP3_ARATH.

Description E-value Query
Range
Subject
Range
gi|45773894, gi|... - gi|45773894|gb|AAS76751.1| At4g24230 [Arabidopsis thaliana], gi|42600567|gb|AAS21130.1| At4g24230 [A...
457.0 [0..1] [362..1]

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Predicted Domain #1
Region A:
Residues: [1-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVFLEMLLT AVVALLFSFL LAKLVSVATV ENDLSSDQPL KPEIGVGVTE DVRFGMKMDA  60
   61 RVLESQRNFQ VVDENVELVD RFLSEEADRV YEVDEAVTGN AKICGDREAE SSAAASSENY 120
  121 VIAEEVILVR GQDEQSDSAE AESISSVSPE NVVAEEIKSQ GQEEVTELGR SGCVENEESG 180
  181 GDVLVAESEE VRVEKSSNMV EESDAEAENE EKTELTIEED DDWEGIE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [228-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSELEKAFAA AVNLLEESGK AEEIGAEAKM ELFGLHKIAT EGSCREAQPM AVMISARAKW  60
   61 NAWQKLGNMS QEEAMEQYLA LVSKEIPGLT KAGHTVGKMS EMETSVGLPP NSGSLEDPTN 120
  121 LVTTGVDESS KNGIP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.0
Match: 2copA
Description: Solution structure of RSGI RUH-040, an ACBP domain from human cDNA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle