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View Structure Prediction Details

Protein: P2C25_ARATH
Organism: Arabidopsis thaliana
Length: 396 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2C25_ARATH.

Description E-value Query
Range
Subject
Range
P2C02_ARATH - Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1
307.0 [0..1] [395..1]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCSVAVCNS PVFSPSSSLF CNKSSILSSP QESLSLTLSH RKPQTSSPSS PSTTVSSPKS  60
   61 PFRLRFQKPP SGFAPGPLSF GSESVSASSP PGGVLKRKRP 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [101-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRLDIPIGVA GFVAPISSSA AVAATPREEC REVEREGDGY SVYCKRGRRE AMEDRFSAIT  60
   61 NLHGDRKQAI FGVYDGHGGV KAAEFAAKNL DKNIVEEVVG KRDESEIAEA VKHGYLATDA 120
  121 SFLKEEDVKG GSCCVTALVN EGNLVVSNAG DCRAVMSVGG VAKALSSDHR PSRDDERKRI 180
  181 ETTGGYVDTF HGVWRIQGSL AVSRGIGDAQ LKKWVIAEPE TKISRIEHDH EFLILASDGL 240
  241 WDKVSNQEAV DIARPLCLGT EKPLLLAACK KLVDLSASRG SSDDISVMLI PLRQFI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.69897
Match: 1a6qA
Description: CRYSTAL STRUCTURE OF THE PROTEIN SERINE/THREONINE PHOSPHATASE 2C AT 2 A RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.29765002420868 bayes_pls_golite062009
phosphatase activity 6.46633224572308 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.25564034681743 bayes_pls_golite062009
protein serine/threonine phosphatase activity 5.66354576593165 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.62997267604309 bayes_pls_golite062009
hydrolase activity 4.10826723952347 bayes_pls_golite062009
binding 1.74689317666387 bayes_pls_golite062009
catalytic activity 1.53401212718168 bayes_pls_golite062009
protein binding 0.425331902048676 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle