| Protein: | gi|15234730, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 415 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15234730, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
467.0 | [0..1] | [410..162] |
|
Region A: Residues: [1-181] |
1 11 21 31 41 51
| | | | | |
1 MKFVVEILGG SSFEIEVERT DTLLVVKQKI EKSQRVPVSK QTLIVDGIFI LREDLNLDQC 60
61 QIFHDSQIQL EVSPDVNPIH NNDDQIPQTE QSPPAPWISV EEYFAEQDWP LTEEEIRKIY 120
121 SYRPETTQDI SKIQDAHQTE ESPPSNSVKE TVNIQDSSVK FASKNNNDQV PPTKQFPQSN 180
181 L
|
| Detection Method: |  |
| Confidence: | 15.69897 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0934358341245259 | bayes_pls_golite062009 |
| protein binding | 0.03789551947602 | bayes_pls_golite062009 |
|
Region A: Residues: [182-415] |
1 11 21 31 41 51
| | | | | |
1 VKKITNGKKR VRQMLVYVSP YPGMNEVPTN ILVQVKVTDE VKTLRGLMKL AQEGYIFTHN 60
61 NQVLNEDQSY ECNSVKPLDT IVIVPRRVIQ ETSKIQDSSV TVQVPQMEQS PASNSVKEIT 120
121 DPKKKIKVYV VAASSECKGL KRFIEVDVNS TDQVKILRTE LVESGRRGHI RMPHEGYFFV 180
181 DRKKERVLNE DQSFEWNRVL PAETVYMVSG RDTHFASSFT RGSKVTMLCA QKVL
|
| Detection Method: | |
| Confidence: | 3.19 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0155013961187369 | bayes_pls_golite062009 |
