| Protein: | AGD6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 459 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGD6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
261.0 | [0..1] | [451..1] |
|
|
220.0 | [0..1] | [459..1] |
|
|
218.0 | [0..1] | [459..1] |
|
|
211.0 | [0..3] | [458..5] |
|
|
205.0 | [0..3] | [458..6] |
|
|
200.0 | [0..1] | [420..1] |
|
|
199.0 | [0..3] | [435..6] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MAATRQLRTL QSQPENKVCV DCAQKNPQWA SVSYGIFMCL ECSGKHRGLG VHISFVRSVT 60
61 MDSWSAIQIK KMEAGGNERL NKFFAQYGIA KETDIISKYN SNAASVYRDR IQALAEGRPW 120
121 NDPPV
|
| Detection Method: |  |
| Confidence: | 42.0 |
| Match: | 2iqjA |
| Description: | No description for 2iqjA was found. |
|
Region A: Residues: [126-235] |
1 11 21 31 41 51
| | | | | |
1 VKEANKKPPL AQGGYGNNNN NNNGGWDSWD NDDSYKSDMR RNQSANDFRA SGNREGAHVK 60
61 SKSSEDIYTR SQLEASAAGK ESFFARRMAE NESKPEGLPP SQGGKYVGFG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.548 | a.60.8 | HRDC-like |
| View | Download | 0.471 | d.58.9 | RuBisCO, large subunit, small (N-terminal) domain |
| View | Download | 0.374 | a.2.17 | Description not found. |
| View | Download | 0.341 | a.24.26 | Description not found. |
| View | Download | 0.338 | d.58.9 | RuBisCO, large subunit, small (N-terminal) domain |
| View | Download | 0.327 | d.58.19 | Bacterial exopeptidase dimerisation domain |
| View | Download | 0.323 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.298 | a.11.1 | Acyl-CoA binding protein |
| View | Download | 0.251 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.234 | a.77.1 | DEATH domain |
|
Region A: Residues: [236-459] |
1 11 21 31 41 51
| | | | | |
1 SSSAPPPRNN QQDDVFSVVS QGFGRLSLVA ASAAQSAASV VQTGTKEFTS KVKEGGYDHK 60
61 VSETVNVVAN KTTEIGHRTW GIMKGVMAMA TQKVEEFTKE GSTSWNQQSE NEGNGYYQNF 120
121 GNGNKAANSS VGGGRPQSSS TSGHYNNSQN SNSWDSWGEN ENKKTEAVAP KGSSASNDDD 180
181 GWTGWDDHDA KDDGFDGHYQ SAGDKKSAGH NGKSDTAWTG GGFL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
