| Protein: | PUB22_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 435 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB22_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
155.0 | [0..1] | [434..6] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MDQEIEIPSF FLCPISLDIM KDPVIVSTGI TYDRESIEKW LFSGKKNSCP VTKQVITETD 60
61 LTPNHTLRRL IQSWCTLNAS YGIERIPTP
|
| Detection Method: |  |
| Confidence: | 10.221849 |
| Match: | 1t1hA |
| Description: | NMR solution structure of the U box domain from AtPUB14, an armadillo repeat containing protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [90-435] |
1 11 21 31 41 51
| | | | | |
1 KPPICKSEIE KLIKESSSSH LNQVKCLKRL RQIVSENTTN KRCLEAAEVP EFLANIVSNS 60
61 VDTYNSPSSS LSSSNLNDMC QSNMLENRFD SSRSLMDEAL SVLYHLDTSE TALKSLLNNK 120
121 KGTNLVKTLT KIMQRGIYES RAYAALLLKK LLEVADPMQI ILLERELFGE VIQILHDQIS 180
181 HKATRSAMQI LVITCPWGRN RHKAVEGGTI SMIIELLMDD TFSSERRNSE MAMVVLDMLC 240
241 QCAEGRAEFL NHGAAIAVVS KKILRVSQIT SERAVRVLLS VGRFCATPSL LQEMLQLGVV 300
301 AKLCLVLQVS CGNKTKEKAK ELLKLHARVW RESPCVPRNL YDSYPA
|
| Detection Method: | |
| Confidence: | 29.522879 |
| Match: | 2jdqA |
| Description: | No description for 2jdqA was found. |
