| Protein: | Y5872_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 519 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y5872_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
472.0 | [0..13] | [519..13] |
|
|
321.0 | [0..4] | [499..88] |
|
|
309.0 | [0..5] | [503..90] |
|
|
291.0 | [0..4] | [500..101] |
|
|
279.0 | [0..8] | [485..423] |
|
|
264.0 | [0..47] | [499..11] |
|
|
263.0 | [0..7] | [497..85] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MKQKNQHKKK KKRSCAAKPS GDGTTSDGNK KDVEEERKDG EGKREIENVG KNFIESLMEA 60
61 FCSVSMEEAM AAYKEAGGDL NKAAEILSDL VESGDD
|
| Detection Method: |  |
| Confidence: | 0.95 |
| Match: | 2daiA |
| Description: | No description for 2daiA was found. |
|
Region A: Residues: [97-181] |
1 11 21 31 41 51
| | | | | |
1 PSTSSVASGS SGQETASTSE YGAGSSSSCS EDLTRDRWFK GSKQSRVIAA TGMVSSVIAK 60
61 DYLKPNPVRK EFPMMERSKE LCGNG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.783 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.625 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.542 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.488 | a.130.1 | Chorismate mutase II |
| View | Download | 0.488 | a.130.1 | Chorismate mutase II |
| View | Download | 0.461 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.461 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.423 | a.7.16 | Description not found. |
| View | Download | 0.398 | a.130.1 | Chorismate mutase II |
| View | Download | 0.397 | a.118.1 | ARM repeat |
|
Region A: Residues: [182-336] |
1 11 21 31 41 51
| | | | | |
1 KKAADREKAE QFLSSMLGDD CELSMAVVRD VLCQCGYDVD MALNVLLDMS SSSTDDSLSG 60
61 KCFGIGVSDS LAESSFDTDT SDCELFWGGD YSQRDYAKAL MSSQDPFATT QGIDELGLPQ 120
121 KVLESLFNIR QNPKHESKTT SWRNVAKKMQ SLGID
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [337-414] |
1 11 21 31 41 51
| | | | | |
1 ASSSSGEEPH PNTFVKDDSY HELRKGANDQ WNVTKSYYQK AAEAYSKGGR AHAAYLSDKG 60
61 RVASKQAQRA DERASQDI
|
| Detection Method: | |
| Confidence: | 21.366532 |
| Match: | PF08590.1 |
| Description: | No description for PF08590.1 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.949 | N/A | N/A | a.7.16 | Description not found. |
| View | Download | 0.939 | N/A | N/A | a.29.13 | Description not found. |
| View | Download | 0.916 | N/A | N/A | a.7.16 | Description not found. |
| View | Download | 0.907 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.906 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.897 | N/A | N/A | a.2.15 | Description not found. |
| View | Download | 0.866 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.866 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.854 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.853 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
|
Region A: Residues: [415-519] |
1 11 21 31 41 51
| | | | | |
1 FVARNKGIEN VVTIDLHGQH VKPAMKLLKL HLLFGSYVPS IQTLRVITGC GASGFGKSKV 60
61 KQSVVKLLER EGVRYCEENR GTLLIKLDGG SREFSFLDTE SDSDE
|
| Detection Method: | |
| Confidence: | 20.69897 |
| Match: | 2d9iA |
| Description: | No description for 2d9iA was found. |
