| Protein: | gi|15229038, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 881 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15229038, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
341.0 | [0..15] | [413..5] |
|
Region A: Residues: [1-366] |
1 11 21 31 41 51
| | | | | |
1 MAVLSVGFFA CRSHFPVLPL FYCFSKVQLN TVAAAMETVD DKDSDHHHDK GSNKTSKAPE 60
61 WKKLNSKDLG ITTSMISKPT RIVLNGLKSK GYDVYLVGGC VRDLILKRTP KDFDILTSAE 120
121 LREVVRSFSR CEIIGKKFPI CHVHIGNDMI EVSSFSTSAQ NSLRNTRTGS GKSNGSYDED 180
181 SIRFNNCLQR DFTINGLMFD PYAKVIYDYL GGIEDIKKAK VRTVFHAGTS FQEDSARILR 240
241 GTRIAARLGF TISKETAHFL KNLSFLVQRL HRGRILLEMN YMLAYGSAEA SLRLLWKFGI 300
301 LEILLPIQAA YLVRTGFKRR DKRSNLLLSL FGNLDKLLAP DKPCHSSLWL TILALHKALA 360
361 DQPRYP
|
| Detection Method: |  |
| Confidence: | 71.39794 |
| Match: | 1mivA |
| Description: | tRNA CCA-adding enzyme, C-terminal domains; tRNA CCA-adding enzyme, head domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.222270543382941 | bayes_pls_golite062009 |
| transferase activity | 0.00393984128503999 | bayes_pls_golite062009 |
|
Region A: Residues: [367-467] |
1 11 21 31 41 51
| | | | | |
1 SVVAAFSLAV HNGGDVLEAV KNTRKVTKPH NRSFFELLEP EEMDSQTLLD EVMDFDSSIK 60
61 EALGQMTDGR FISKAMAAYP QAPYSDMVFI PLQLYLDARR I
|
| Detection Method: | |
| Confidence: | 1.02 |
| Match: | 2fo7A |
| Description: | Crystal structure of an 8 repeat consensus TPR superhelix (trigonal crystal form) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [468-538] |
1 11 21 31 41 51
| | | | | |
1 FECVKENGQK GFVPKQDSKR EPEDDLETKP ILKKHKENSE EENKEQIKGT VELLETKSDQ 60
61 APVKETVEGL D
|
| Detection Method: | |
| Confidence: | 14.39794 |
| Match: | 2f3jA |
| Description: | No description for 2f3jA was found. |
|
Region A: Residues: [539-762] |
1 11 21 31 41 51
| | | | | |
1 ETPDSVEVPK KYMSGLLIRC FPSRKKTLYV CCLPRDTKMP DIIDFFKDVG QVVSVQLTTK 60
61 RNGLRLSTGF VEFASANEAK KALDMKNGEY LCGNKLILGM ASCENIAQPK YEDYIQQESL 120
121 PIEEEETPPK IVQSGANTLG CSIQAAAFSM TDILSFHFYR LDFFNDVGEV VSVRLIVSPE 180
181 SKHVGYGFVE FASPCLANMA LEKKNGEYLH DHKIFLGVAK TAPY
|
| Detection Method: | |
| Confidence: | 35.0 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [763-881] |
1 11 21 31 41 51
| | | | | |
1 PPRIKYNLAE KLWYEDYLLR DSLLIEEDET VEGLDETPSC VEAVALREKV LIIAHVPRRT 60
61 KISHIIDFFK DAGQVVNVRL IVDQKGKPFG RGFVEFTSAD EAKKVRLVYS NDEKYFTSH
|
| Detection Method: | |
| Confidence: | 9.39794 |
| Match: | 2hgnA |
| Description: | No description for 2hgnA was found. |
