| Protein: | HFA6B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 406 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HFA6B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
262.0 | [0..35] | [405..26] |
|
Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MDPSFRFIKE EFPAGFSDSP SPPSSSSYLY SSSMAEAAIN DPTTLSYPQP LEGLHESGPP 60
61 PFLTKTYDLV EDSRTNHVVS WSKSNNSFIV WDPQAFSVTL LPRFFKHNNF SSFVRQLNTY 120
121 GFRKVNPDRW EFANEGFLRG QKHLLKNIRR RK
|
| Detection Method: |  |
| Confidence: | 29.30103 |
| Match: | 1hksA |
| Description: | SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [153-406] |
1 11 21 31 41 51
| | | | | |
1 TSNNSNQMQQ PQSSEQQSLD NFCIEVGRYG LDGEMDSLRR DKQVLMMELV RLRQQQQSTK 60
61 MYLTLIEEKL KKTESKQKQM MSFLARAMQN PDFIQQLVEQ KEKRKEIEEA ISKKRQRPID 120
121 QGKRNVEDYG DESGYGNDVA ASSSALIGMS QEYTYGNMSE FEMSELDKLA MHIQGLGDNS 180
181 SAREEVLNVE KGNDEEEVED QQQGYHKENN EIYGEGFWED LLNEGQNFDF EGDQENVDVL 240
241 IQQLGYLGSS SHTN
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
