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View Structure Prediction Details

Protein: DNJ15_ARATH
Organism: Arabidopsis thaliana
Length: 410 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNJ15_ARATH.

Description E-value Query
Range
Subject
Range
gi|124530383, gi... - gi|124530383|ref|ZP_01701069.1| chaperone protein DnaJ [Escherichia coli B], gi|124499274|gb|EAY4676...
gi|110640228, gi... - gi|110640228|ref|YP_667956.1| chaperone protein DnaJ [Escherichia coli 536], gi|110341820|gb|ABG6805...
330.0 [0..7] [374..5]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKKLEGSS APANRRDPYE VLCVSKDAND QEIKSAYRKL ALKYHPDKNA NNPDASELFK  60
   61 EVAFSYSILS DPEKRRHYDN AGFEALDADG MDMEIDLSNL GTVNTMFAAL FSKLGVPIK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.0
Match: 1xblA
Description: NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [120-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTVSANVLEE AMNGTVTVRP LPIGTSVSGK VEKQCAHFFG VTISEQQAES GVVVRVTSTA  60
   61 QSKFKLLYFE QDSSGGYGLA LQEEREKTGK VTSAGMYFLH FQVYRMDTTV NALAAAKDPE 120
  121 SAFFKRLEGL QPCEVSELKA GTHIFAVYGD NFFKTASYTI EALCAKTYED TTEKLKEIEA 180
  181 QILRKRNELR QFETEYRKAL ARFQEVTNRY TQEKQTVDEL LKQRDTIHST FSVVKTPSGN 240
  241 NLSNGSSSKA QGDESKGDGD SAGEEGGTEN RDKSKRKWFN LNLKGSDKKL G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.09691
Match: 1nltA
Description: The crystal structure of Hsp40 Ydj1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.036672061154828 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle