| Protein: | gi|25403098, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 711 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25403098, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
624.0 | [0..62] | [636..1] |
|
Region A: Residues: [1-572] |
1 11 21 31 41 51
| | | | | |
1 MKRLTYPLSS LRNIVEHFHC NTFHKPISSL SISPTLKSES REPSSTQDPY SLLKQDPVDI 60
61 CLSLWVKSFS SPPSATFSNL TGFLSKFDLW VLAYQRTCAH VTGTFPPRNA IHANALRSLL 120
121 SLQNAVTRSG GKFRWNDKMN QYVRSPKDKI SMNGGEGMSK GKVRRIIESE EPIFQDRVVH 180
181 EVLLMILEPF FEARFSSKSH GFRPGRNPHT VIRTIRSNFA GYLWFMKGDV SEMLDHVDVD 240
241 VVMNCLQKVV KDRKVLGLIE SSLKFSDKRV LKRVVEKHGN DNGLGTKRRI EREKRNKTKK 300
301 KILSDDEPKP DPYWLRTFYS FAPKEAAKVP SYGYCGVLSP LLANVCLNEL DRFMETKIVE 360
361 YFSPCKDDSI WKESIEDGCH NPAWPEFVPS SGKEKTRKMD YIRYGGHFLI GIRGPREDAV 420
421 KMRKEIIDFC DRVFGVRLDN SKLEIEHISR GIQFLDHIIC RRVIYPTLRY TGSGGSIVSK 480
481 KGVGTLLSVS ASLEQCIRQF RRLAFVKGDK DPEPLPCNPM LYSSQSHSNS QMNKFLETMA 540
541 DWYKYADNRK KAVGFCAYVI RSSLAKLYAA RY
|
| Detection Method: |  |
| Confidence: | 2.11 |
| Match: | 1xr7A |
| Description: | Crystal structure of RNA-dependent RNA Polymerase 3D from human rhinovirus serotype 16 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.455736130840876 | bayes_pls_golite062009 |
| transferase activity | 0.1348265745695 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0290819848545603 | bayes_pls_golite062009 |
|
Region A: Residues: [573-711] |
1 11 21 31 41 51
| | | | | |
1 RLKSRAKVYS IASRDLSHPL SESSNNSAPE YSDLLRMGLV DAIEGVQFSR MSLIPSCDYT 60
61 PFPRNWIPNH EQVLQEYIRL QDPKFFCGLH RSIKREGLTL PQDEISEAVW DFKTLGAWRS 120
121 KYENKREADD GLQKLDSQT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
