| Protein: | PTA16_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 510 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTA16_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
251.0 | [0..93] | [408..3] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MASSSTSFPL TTAPPQGVRF NRRKPRLTVW AKQTAFQLGK TKGDDDSEGK QKGKNPFQFD 60
61 FGKLPDMKSL IPVVTNPSTG LVFGNNRKKD P
|
| Detection Method: |  |
| Confidence: | 21.154902 |
| Match: | 2et6A |
| Description: | No description for 2et6A was found. |
|
Region A: Residues: [92-409] |
1 11 21 31 41 51
| | | | | |
1 GTIFVAGATG QAGIRIAQTL LQRGFSVRAG VPDLGAAQDL ARVAATYKIL SNDEVKRLNA 60
61 VQSPFQDAES IAKAIGNATK VVVTVGATEN GPDAQVSTSD ALLVVQAAEL AGVSHVAIVY 120
121 DGTISGSTYN VLDGITSFFG NLFAKSQPLT ISDLIEKVAQ TDVAYTLIKT SLTEDFSPEK 180
181 AYNVVVSAEG SNSGSGSSSS EAYKVPKLKI ASLVADIFAN TAVAENKVVE VSTDPSAPSR 240
241 PVDELFSVIP EDGRRKVYAD AIARERAEEE AKVAADKARE AAEAAKEFEK QMQKLSEKEA 300
301 EAASLAEDAQ QKADAVGV
|
| Detection Method: | |
| Confidence: | 59.221849 |
| Match: | 1bxkA |
| Description: | dTDP-glucose 4,6-dehydratase (RmlB) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.26736023026862 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.68812524232244 | bayes_pls_golite062009 |
|
Region A: Residues: [410-510] |
1 11 21 31 41 51
| | | | | |
1 TVDGLFNKAK DISSGLSWNK LGSQFATAIQ NASETPKVQV ATVRGQAKAR NLPPKKAVVK 60
61 QRPSSPFASK PKEERPKKPE KEVRKVFGGL FKQETIYIDD D
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
