| Protein: | FACR1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 491 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FACR1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
337.0 | [0..1] | [491..1] |
|
|
312.0 | [0..3] | [491..13] |
|
|
308.0 | [0..1] | [491..1] |
|
|
308.0 | [0..3] | [490..10] |
|
|
305.0 | [0..4] | [491..3] |
|
|
305.0 | [0..4] | [491..118] |
|
|
304.0 | [0..1] | [491..1] |
|
Region A: Residues: [1-410] |
1 11 21 31 41 51
| | | | | |
1 MESNCVQFLG NKTILITGAP GFLAKVLVEK ILRLQPNVKK IYLLLRAPDE KSAMQRLRSE 60
61 VMEIDLFKVL RNNLGEDNLN ALMREKIVPV PGDISIDNLG LKDTDLIQRM WSEIDIIINI 120
121 AATTNFDERY DIGLGINTFG ALNVLNFAKK CVKGQLLLHV STAYISGEQP GLLLEKPFKM 180
181 GETLSGDREL DINIEHDLMK QKLKELQDCS DEEISQTMKD FGMARAKLHG WPNTYVFTKA 240
241 MGEMLMGKYR ENLPLVIIRP TMITSTIAEP FPGWIEGLKT LDSVIVAYGK GRLKCFLADS 300
301 NSVFDLIPAD MVVNAMVAAA TAHSGDTGIQ AIYHVGSSCK NPVTFGQLHD FTARYFAKRP 360
361 LIGRNGSPII VVKGTILSTM AQFSLYMTLR YKLPLQILRL INIVYPWSHG
|
| Detection Method: |  |
| Confidence: | 68.045757 |
| Match: | 1g1aA |
| Description: | dTDP-glucose 4,6-dehydratase (RmlB) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [411-491] |
1 11 21 31 41 51
| | | | | |
1 DNYSDLSRKI KLAMRLVELY QPYLLFKGIF DDLNTERLRM KRKENIKELD GSFEFDPKSI 60
61 DWDNYITNTH IPGLITHVLK Q
|
| Detection Method: | |
| Confidence: | 11.09691 |
| Match: | PF03015.10 |
| Description: | No description for PF03015.10 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.754 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.754 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.611 | N/A | N/A | a.29.8 | Description not found. |
| View | Download | 0.574 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.570 | N/A | N/A | a.7.16 | Description not found. |
| View | Download | 0.540 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.510 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.489 | N/A | N/A | a.28.1 | ACP-like |
| View | Download | 0.489 | N/A | N/A | a.28.1 | ACP-like |
| View | Download | 0.467 | N/A | N/A | a.240.1 | Description not found. |
| View | Download | 0.449 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.365 | N/A | N/A | a.228.1 | Description not found. |
| View | Download | 0.363 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.333 | N/A | N/A | a.240.1 | Description not found. |
| View | Download | 0.275 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
