| Protein: | SETH6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 635 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SETH6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
518.0 | [0..14] | [627..3] |
|
|
516.0 | [0..15] | [635..3] |
|
|
510.0 | [0..29] | [632..63] |
|
|
508.0 | [0..15] | [634..3] |
|
Region A: Residues: [1-163] |
1 11 21 31 41 51
| | | | | |
1 MGVVTVPESN KQSVAAKRAF RPSSSIRHTP QWPVSDVTSD LTIEVGSATF SLHKFPLVSR 60
61 SGRIRKLVLE SKDTNLNLAA VPGGSESFEL AAKFCYGVGV QYNSSNIAAL RCVAHYLEMT 120
121 EDLSEKNLEA RTEAYLKDSI FNDISNSITV LHSCERLLPV AEE
|
| Detection Method: |  |
| Confidence: | 24.39794 |
| Match: | 2if5A |
| Description: | No description for 2if5A was found. |
|
Region A: Residues: [164-231] |
1 11 21 31 41 51
| | | | | |
1 INLVGRLVNA IAVNACKEQL ASGLLKLDQS FSCGVPETAK PCDWWGRSLP ILKLDFFQRV 60
61 LSAMKSKG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.540 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.452 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.452 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.443 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.442 | a.4.1 | Homeodomain-like |
| View | Download | 0.425 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.425 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.421 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.411 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.404 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.235 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.223 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.212 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.212 | d.58.4 | Dimeric alpha+beta barrel |
|
Region A: Residues: [232-406] |
1 11 21 31 41 51
| | | | | |
1 LNHDIISDIL MSYARKSLQI IREPNLVKSD SDLQRKQRIV LEAVVGLLPT QANKSSIPIS 60
61 FLSSLLKTAI GSGTSVSCRS DLERRISHLL DQAILEDILI PANIGAMYDT DSVQRIFSMF 120
121 LNLDECEYRD DDDDEEDAVD ESEMAMYDFE GAESPKQSSI FKVSKLMDSY LAEVA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [407-544] |
1 11 21 31 41 51
| | | | | |
1 LDSSLPPSKF IALAELLPDH ARVVCDGLYR AVDIFLKVHP HMKDSERYRL CKTVSCKKLS 60
61 QDASSHAAQN ERLPVQIAVQ VLFYEQTRLK NAMTSGGGTG GSNQSQFFLF PNRSGSGMAS 120
121 GAISPRDNYA SVRRENRE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.549 | N/A | N/A | a.188.1 | Description not found. |
| View | Download | 0.392 | N/A | N/A | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.376 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.368 | N/A | N/A | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.359 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.301 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.301 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.284 | N/A | N/A | a.182.1 | GatB/YqeY domain |
| View | Download | 0.236 | N/A | N/A | a.182.1 | GatB/YqeY domain |
|
Region A: Residues: [545-635] |
1 11 21 31 41 51
| | | | | |
1 LRLEVARMRM RLTDLEKDHV SMKRDFVKPQ SRRRRYGMLR KLSRGLNKLN AIVLRFRSSQ 60
61 SVASSGKKHT EEKTNSERRF MFQKRRCHSV S
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
