| Protein: | SMC5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1053 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for SMC5_ARATH.
|
Region A: Residues: [1-145] |
1 11 21 31 41 51
| | | | | |
1 MSERRAKRPK ISRGEDDFLP GNIIEIELHN FMTFNHLVCK PGSRLNLVIG PNGSGKSSLV 60
61 CAIALCLGGE PQLLGRATSV GAYVKRGEDS GYVKISLRGN TREENLTIFR KIDTRNKSEW 120
121 MFNGSTVSKK DIVEIIQKFN IQVNN
|
| Detection Method: |  |
| Confidence: | 23.522879 |
| Match: | 1w1wA |
| Description: | Sc Smc1hd:Scc1-C complex, ATPgS |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [146-480] |
1 11 21 31 41 51
| | | | | |
1 LTQFLPQDRV CEFAKLTPVQ LLEETEKAVG DPQLPVHHRA LVEKSRDLKQ LERAVAKNGE 60
61 TLNQLKALVD EQEKDVERVR QRELFLTKVD SMKKKLPWLK YDMKKAEYMD AKKRMKEAEK 120
121 KLDEAAKNLN SMKEPIEKQK KEKAETDSKC KKVKNLMDAN GRNRCHLLEK EDEADARVVA 180
181 TYKELEELKK QEEHRQERIL KATEDLVAAE RELQNLPVYE RPVAKLEELS SQVTELHHSI 240
241 NGKKNQKEDN EKLLSQKRYT LRQCVDKLKD MENANNKLLK ALANSGADRI FDAYQWVQQN 300
301 RHEFKREVYG PVLVEVNVPN RENACFLEGH VSFYI
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [481-555] |
1 11 21 31 41 51
| | | | | |
1 WKSFITQDPE DRDLLVKNLK RFDVPVLNYV GNSGNQKAPF HISDQMRSLG IHARLDQIFD 60
61 APDAVKEVLN SQFGL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [556-825] |
1 11 21 31 41 51
| | | | | |
1 EDSYIGSKIT DQRAEEVYKL GIKDFWTPDN HYRWSSSRYG GHSSASVDSV YQSRLLLCGV 60
61 DVGELEKLRS RKEELEDSIL FMEETHKSLQ TEQRRLEEEA AKLHKEREEI VNVSYLEKKK 120
121 RRELESRYQQ RKTKLESLEQ EEDMDASVAK LIDQASRANA DRYTYAINLK KLLVEAVAHK 180
181 WSYAEKHMAS IELERKIRES EINIKQYEKT AQQLSLAVEY CKKEVEGKQQ RLATAKRDAE 240
241 SVATITPELK KEFMEMPTTV EELEAAIQDN
|
| Detection Method: | |
| Confidence: | 3.09691 |
| Match: | 1dg3A |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [826-883] |
1 11 21 31 41 51
| | | | | |
1 LSQANSILFI NENILQEYEH RQSQIYTIST KLETDKRDLS ICMKEIDSLK EKWLPTLR
|
| Detection Method: | |
| Confidence: | 9.045757 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [884-961] |
1 11 21 31 41 51
| | | | | |
1 QLVGQINETF SHNFQEMAVA GEVSLDERDT DFDQYGIHIK VKFRESGQLQ VLSSHHQSGG 60
61 ERSVSTILYL VSLQDLTN
|
| Detection Method: | |
| Confidence: | 9.045757 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [962-1053] |
1 11 21 31 41 51
| | | | | |
1 CPFRVVDEIN QGMDPINERK MFQQLVRAAS QPNTPQCFLL TPKLLPELEY SEACSILNIM 60
61 NGPYIAEPSK VWSLGDSWGS LNRRRTEASQ CS
|
| Detection Method: | |
| Confidence: | 21.30103 |
| Match: | 1xewY |
| Description: | Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases. |
Matching Structure (courtesy of the PDB): |
|
