| Protein: | PP378_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 752 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PP378_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
760.0 | [0..4] | [752..250] |
|
Region A: Residues: [1-617] |
1 11 21 31 41 51
| | | | | |
1 MTILTVQSSF SSSRVPVIKN ANFDQIPSWV SLKSSTSSPS VKISHKQGQV ENLHLVSLSK 60
61 HRKLNEAFEF LQEMDKAGVS VSSYSYQCLF EACRELRSLS HGRLLHDRMR MGIENPSVLL 120
121 QNCVLQMYCE CRSLEDADKL FDEMSELNAV SRTTMISAYA EQGILDKAVG LFSGMLASGD 180
181 KPPSSMYTTL LKSLVNPRAL DFGRQIHAHV IRAGLCSNTS IETGIVNMYV KCGWLVGAKR 240
241 VFDQMAVKKP VACTGLMVGY TQAGRARDAL KLFVDLVTEG VEWDSFVFSV VLKACASLEE 300
301 LNLGKQIHAC VAKLGLESEV SVGTPLVDFY IKCSSFESAC RAFQEIREPN DVSWSAIISG 360
361 YCQMSQFEEA VKTFKSLRSK NASILNSFTY TSIFQACSVL ADCNIGGQVH ADAIKRSLIG 420
421 SQYGESALIT MYSKCGCLDD ANEVFESMDN PDIVAWTAFI SGHAYYGNAS EALRLFEKMV 480
481 SCGMKPNSVT FIAVLTACSH AGLVEQGKHC LDTMLRKYNV APTIDHYDCM IDIYARSGLL 540
541 DEALKFMKNM PFEPDAMSWK CFLSGCWTHK NLELGEIAGE ELRQLDPEDT AGYVLPFNLY 600
601 TWAGKWEEAA EMMKLMN
|
| Detection Method: |  |
| Confidence: | 9.30103 |
| Match: | 1xi4A |
| Description: | Clathrin D6 Coat |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [618-752] |
1 11 21 31 41 51
| | | | | |
1 ERMLKKELSC SWIQEKGKIH RFIVGDKHHP QTQEIYEKLK EFDGFMEGDM FQCNMTERRE 60
61 QLLDHSERLA IAFGLISVHG NAPAPIKVFK NLRACPDCHE FAKHVSLVTG HEIVIRDSRR 120
121 FHHFKEGKCS CNDYW
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 1wao1 |
| Description: | PP5 structure |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.02652482814057 | bayes_pls_golite062009 |
