| Protein: | VIP5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 643 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VIP5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
395.0 | [0..1] | [643..1] |
|
Region A: Residues: [1-259] |
1 11 21 31 41 51
| | | | | |
1 MGDLENLLLE AAGRTNSAGR SRHPPSSRRR EGSYSDGSSD SRDDSDEDRG YASRKPSGSQ 60
61 VPLKKRLEAE REDRAARVEG GYGDGPSDRE GDSSEESDFG DDLYKNEEDR QKLAGMTEFQ 120
121 REMILSERAD KKGDKNFTEK LRSKRESEKT PVSKKETQPL PASRGVRSSA RSADRAAAKD 180
181 DALNELRAKR MKQQDPAALR KLRDASKGGS GSRDFSSTKR KPLASSNLSS SSQSDSDSRS 240
241 QSDDEGSNGG MLDSDDDRS
|
| Detection Method: |  |
| Confidence: | 6.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [260-395] |
1 11 21 31 41 51
| | | | | |
1 DVPTFEDVKE VTIRRSKLAK WLMEPFFEEL IVGCFVRVGI GRSKSGPIYR LCWVKNVDAT 60
61 DPDKTYKLEN KTTHKYLNVV WGNETSAARW QMAMISDGHP LEEEYRQWIR EVERTNGRMP 120
121 TKQDISEKKE AIQRTN
|
| Detection Method: | |
| Confidence: | 49.39794 |
| Match: | 2bzeA |
| Description: | No description for 2bzeA was found. |
|
Region A: Residues: [396-643] |
1 11 21 31 41 51
| | | | | |
1 SFVYSAETVK QMLQEKKSAS VRPMNVAAEK DRLRKELEIA QSKNDEAGVE RIKSKIKQLD 60
61 ASRNKKGVDK KALKLAEMNK KNRAENFKNA SEVKSITASL KAGEAGYDPF SRRWTRSSNY 120
121 YNGKNKGKDG EENEAAVAAA VETNGADAGA GVEATEAALE AAAEAGKLID TRAPIGQGAE 180
181 HNQLHNFELS LSLTALQKYG GPQGVQKAFM ARKQLTEATV GCRVAENDGK RHGLTLTVSD 240
241 YKRRRGLL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
