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View Structure Prediction Details

Protein: gi|15229720, gi|...
Organism: Arabidopsis thaliana
Length: 204 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15229720, gi|....

Description E-value Query
Range
Subject
Range
gi|9294045, gi|9... - gi|9294045|dbj|BAB02002.1| unnamed protein product [Arabidopsis thaliana], gi|91805515|gb|ABE65486.1...
178.0 [0..12] [187..323]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLKPLRHII HEVNRLKKND IIIPFLRSGD YRSFFNLSLT FTPNRIQLPH QEYYLRLSRM  60
   61 HDVASFCAEL IFGLKGLWRN SCFTLEGI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.853 N/A N/A a.24.13 Domain of the SRP/SRP receptor G-proteins

Predicted Domain #2
Region A:
Residues: [89-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SALPSSLSRI ASSLSVFSKW FTPETIETKE HFSKSRILLI VTIVKLPEFF AKVSLTHHDF  60
   61 ACDMLRSSCL RVLMDLSPMF NALSTFLATL DVILCLICFM YPTIQLMICT LYPSLV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle