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View Structure Prediction Details

Protein: OEP37_ARATH
Organism: Arabidopsis thaliana
Length: 343 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OEP37_ARATH.

Description E-value Query
Range
Subject
Range
OEP37_PEA - Outer envelope pore protein 37, chloroplastic OS=Pisum sativum GN=OEP37 PE=1 SV=1
585.0 [0..3] [343..2]

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Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADPSSQNPN LATPPPPSSP SPTHQIQSGT SELSPPSRPP CSTLSFLKTA NRPKLRVTSE  60
   61 FDSDSLLFLN KVSCKLFDNL AKLKLSFQNN SQREISQPQV SFTSKHVSVL YDVEEKNTFI 120
  121 KSTLDVHPRL QLRALHNVKA QQGEVAMEAN LTEPGYSLEL SSPVPIGYPR ATLKFPLGEI 180
  181 SLQEKDEEEE EKQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [194-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRTLSVNGIL KRQVMNGVCT ALYTDEELRL RYAYKDDALS FIPSISLPSN AASFAFKRRF  60
   61 SPSDKLSYWY NFDSNMWSAV YKRTYGKDYK LKAGYDSDVR LGWASLWVGD EAGKVKTTPM 120
  121 KMKVQFMLQV PQDDIKSSVL MFRVKKRWDI 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.547 d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain
View Download 0.472 d.58.7 RNA-binding domain, RBD
View Download 0.470 d.58.19 Bacterial exopeptidase dimerisation domain
View Download 0.450 c.55.3 Ribonuclease H-like
View Download 0.404 b.1.1 Immunoglobulin


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle