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View Structure Prediction Details

Protein: IQM6_ARATH
Organism: Arabidopsis thaliana
Length: 575 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IQM6_ARATH.

Description E-value Query
Range
Subject
Range
gi|222612815, gi... - gi|78708621|gb|ABB47596.1| calmodulin-binding family protein, putative, expressed [Oryza sativa (jap...
714.0 [0..19] [575..52]
gi|92869803 - gi|92869803|gb|ABE79293.1| IQ calmodulin-binding region [Medicago truncatula]
697.0 [0..2] [565..33]
IQM2_ARATH - IQ domain-containing protein IQM2 OS=Arabidopsis thaliana GN=IQM2 PE=2 SV=1
687.0 [0..2] [574..34]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METKTILRSI SFNDIDSDST ITESPEARKT LYNRSLSGKG TQRSRISPGD VENNFSIKPL  60
   61 TFMKEDDRYK MRIWKPVCEN EHAK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFLALLLGDG TYQAALKLQK VYRSFRTRRR LADCAVVVEQ RWWKVLDFAE LKRSSISFFE  60
   61 IEKQETAVSR WSRARTRAAK VGKGLSKDEK ARKLALQHWL EAIDPRHRYG HNLQFYYHAW 120
  121 LHCDSK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.27
Match: 2ix7C
Description: No description for 2ix7C was found.

Predicted Domain #3
Region A:
Residues: [211-425]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD  60
   61 TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH 120
  121 SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF 180
  181 VDAETGFSPN TKPNNHAELQ TLSRFHSKLS RLDEI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [426-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDEDDNMIEE EQDDEEEPET PSEQGYETAE ETFIAEEEFT YPKSNLFDED IEDYEKPVLK  60
   61 EKIMRRI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [493-575]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSHKGIKSYQ LAERLHSRWS TGAGPRISCM RDYPSELQFR VLEQAHLSPR ASSNSSKISP  60
   61 FAPVRTRGTS LGRSPLAEEL ENL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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