| Protein: | IQM6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 575 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IQM6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
714.0 | [0..19] | [575..52] |
|
|
697.0 | [0..2] | [565..33] |
|
|
687.0 | [0..2] | [574..34] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 METKTILRSI SFNDIDSDST ITESPEARKT LYNRSLSGKG TQRSRISPGD VENNFSIKPL 60
61 TFMKEDDRYK MRIWKPVCEN EHAK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.316 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.278 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.227 | a.8.10 | Description not found. |
| View | Download | 0.222 | a.60.14 | Description not found. |
| View | Download | 0.220 | b.48.1 | mu transposase, C-terminal domain |
|
Region A: Residues: [85-210] |
1 11 21 31 41 51
| | | | | |
1 EFLALLLGDG TYQAALKLQK VYRSFRTRRR LADCAVVVEQ RWWKVLDFAE LKRSSISFFE 60
61 IEKQETAVSR WSRARTRAAK VGKGLSKDEK ARKLALQHWL EAIDPRHRYG HNLQFYYHAW 120
121 LHCDSK
|
| Detection Method: | |
| Confidence: | 1.27 |
| Match: | 2ix7C |
| Description: | No description for 2ix7C was found. |
|
Region A: Residues: [211-425] |
1 11 21 31 41 51
| | | | | |
1 QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD 60
61 TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH 120
121 SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF 180
181 VDAETGFSPN TKPNNHAELQ TLSRFHSKLS RLDEI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [426-492] |
1 11 21 31 41 51
| | | | | |
1 PDEDDNMIEE EQDDEEEPET PSEQGYETAE ETFIAEEEFT YPKSNLFDED IEDYEKPVLK 60
61 EKIMRRI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.367 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.367 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.359 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.295 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.238 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.212 | b.85.1 | Type III antifreeze protein, AFP III |
|
Region A: Residues: [493-575] |
1 11 21 31 41 51
| | | | | |
1 DSHKGIKSYQ LAERLHSRWS TGAGPRISCM RDYPSELQFR VLEQAHLSPR ASSNSSKISP 60
61 FAPVRTRGTS LGRSPLAEEL ENL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.459 | N/A | N/A | g.39.1 | Glucocorticoid receptor-like (DNA-binding domain) |
| View | Download | 0.355 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.329 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.329 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.311 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.275 | N/A | N/A | b.43.4 | Riboflavin synthase domain-like |
| View | Download | 0.275 | N/A | N/A | b.43.4 | Riboflavin synthase domain-like |
| View | Download | 0.235 | N/A | N/A | d.95.2 | Homing endonucleases |
| View | Download | 0.234 | N/A | N/A | b.43.4 | Riboflavin synthase domain-like |
| View | Download | 0.232 | N/A | N/A | d.74.2 | C-terminal domain of arginine repressor |
