| Protein: | PAP4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 242 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAP4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
289.0 | [0..1] | [242..1] |
|
|
244.0 | [0..10] | [242..6] |
|
|
231.0 | [0..47] | [242..62] |
|
|
204.0 | [0..11] | [233..28] |
|
|
203.0 | [0..7] | [233..26] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MALPSCLKTG ALMSPATGFN FSGSLMKSDS GFAVPTKLQS TRKGDRERLR VQAIFSFPPA 60
61 FLTRNGRAEK QKQLKQELLE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.394 | d.271.1 | Description not found. |
| View | Download | 0.355 | d.212.1 | TolA/TonB C-terminal domain |
| View | Download | 0.355 | d.212.1 | TolA/TonB C-terminal domain |
| View | Download | 0.335 | d.224.1 | SufE-like |
| View | Download | 0.308 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.280 | a.17.1 | p8-MTCP1 |
| View | Download | 0.239 | a.4.1 | Homeodomain-like |
|
Region A: Residues: [81-242] |
1 11 21 31 41 51
| | | | | |
1 AIEPLERGAT ASPDDQLRID QLARKVEAVN PTKEPLKSDL VNGKWELIYT TSASILQAKK 60
61 PRFLRSITNY QSINVDTLKV QNMETWPFYN SVTGDIKPLN SKKVAVKLQV FKILGFIPIK 120
121 APDSARGELE ITYVDEELRL SRGDKGNLFI LKMFDPTYRI PL
|
| Detection Method: | |
| Confidence: | 0.976 |
| Match: | 1z24A |
| Description: | The molecular structure of insecticyanin from the tobacco hornworm Manduca sexta L. at 2.6 A resolution. |
Matching Structure (courtesy of the PDB): |
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