| Protein: | gi|25405826, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 661 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25405826, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
538.0 | [0..1] | [648..1] |
|
Region A: Residues: [1-130] |
1 11 21 31 41 51
| | | | | |
1 MEPLPPYFSR AKPPCRLSDP AQPHMLCRRR RPSHPPLSIC FSCKGKQLKR NNYYYYCATC 60
61 NLEFHRGCHI FLPEIRHPFH PSHPLTFISL LLPKFDVTKI PKNWMDSSSS SDESEDDDDD 120
121 EKSIKEECED
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [131-204] |
1 11 21 31 41 51
| | | | | |
1 DGDDDDGDSS DSDDDDNNFD ANNDGASLSD GNHLKCKCCQ VPLEKIYYHC SICKFNLNVE 60
61 CSMRPPPTTI SHLK
|
| Detection Method: | |
| Confidence: | 2.24 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0196698141692984 | bayes_pls_golite062009 |
|
Region A: Residues: [205-348] |
1 11 21 31 41 51
| | | | | |
1 SHEHILTLFP IRLPLPCGAC GLSLSDAEDL VYACLPCNLL VHRSCIYLPR VIKITRHPHR 60
61 LSLTPSLQPG DFSCGVCRQT VDVNYGQYSC DKECHYAVHS KCATRNDVWD GKDLDGVPEE 120
121 PDEFIEPPFL KIDEETIQHF SHHH
|
| Detection Method: | |
| Confidence: | 7.045757 |
| Match: | 1xa6A |
| Description: | Crystal Structure of the Human Beta2-Chimaerin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0980674097362609 | bayes_pls_golite062009 |
|
Region A: Residues: [349-474] |
1 11 21 31 41 51
| | | | | |
1 HLKLHEKKTI GGKDKFCEAC TLPVMISQRY YGCMQCDFVL DETCASLPRK KNHPLHKHPL 60
61 NLHILPLGES AMINKGATSK DIFQCIGCGR IGCGFFYKCD EKDCDEFLLD VRCASLPDPF 120
121 VHDCHP
|
| Detection Method: | |
| Confidence: | 2.13 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0196698141692984 | bayes_pls_golite062009 |
|
Region A: Residues: [475-578] |
1 11 21 31 41 51
| | | | | |
1 HDHPLFFNLT KGNCMGCGSD NCSSYFLECI KCKSFLGIKC ATLPCEAHYI HDRHPITLCY 60
61 GEEDTTSGQY WCEICELKLD PKTWFYSCDF CKITLHVNCL LGED
|
| Detection Method: | |
| Confidence: | 5.39794 |
| Match: | 1v5nA |
| Description: | Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0980674097362609 | bayes_pls_golite062009 |
|
Region A: Residues: [579-661] |
1 11 21 31 41 51
| | | | | |
1 IYLKPCHIFK VGLYYKEVEI ARNDGNSRLF CYTCELRCGQ TLVFKYIGGC KSFCTLRCIG 60
61 NYFDAKDGWV YDAARNLNIF RRI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.938 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.703 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.649 | d.217.1 | SAND domain-like |
| View | Download | 0.585 | b.61.1 | Avidin/streptavidin |
| View | Download | 0.564 | b.1.18 | E set domains |
