| Protein: | COL7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 392 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COL7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
266.0 | [0..16] | [391..64] |
|
|
263.0 | [0..12] | [390..4] |
|
|
248.0 | [0..14] | [390..13] |
|
|
247.0 | [0..15] | [392..27] |
|
|
240.0 | [0..10] | [390..12] |
|
|
232.0 | [0..18] | [390..23] |
|
|
231.0 | [0..17] | [390..1] |
|
|
231.0 | [0..19] | [391..2] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MVVDVESRTA SVTGEKMAAR GCDACMKRSR ASWYCPADDA FLCQSCDASI HSANHLAKRH 60
61 ERVRLQSSSP TETADKTTSV WYEGFRRKAR TPRSKSCAFE KLLQIESNDP LVPELGG
|
| Detection Method: |  |
| Confidence: | 1.09 |
| Match: | 2dfyX |
| Description: | No description for 2dfyX was found. |
|
Region A: Residues: [118-240] |
1 11 21 31 41 51
| | | | | |
1 DEDDGFFSFS SVEETEESLN CCVPVFDPFS DMLIDDINGF CLVPDEVNNT TTNGELGEVE 60
61 KAIMDDEGFM GFVPLDMDLE DLTMDVESLL EEEQLCLGFK EPNDVGVIKE ENKVGFEINC 120
121 KDL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.413 | d.358.1 | Description not found. |
| View | Download | 0.338 | d.131.1 | DNA clamp |
| View | Download | 0.283 | d.131.1 | DNA clamp |
| View | Download | 0.283 | d.131.1 | DNA clamp |
| View | Download | 0.248 | d.131.1 | DNA clamp |
| View | Download | 0.239 | d.98.2 | Description not found. |
| View | Download | 0.238 | d.131.1 | DNA clamp |
| View | Download | 0.200 | b.29.1 | Concanavalin A-like lectins/glucanases |
|
Region A: Residues: [241-392] |
1 11 21 31 41 51
| | | | | |
1 KRVKDEDEEE EEAKCENGGS KDSDREASND KDRKTSLFLR LDYGAVISAW DNHGSPWKTG 60
61 IKPECMLGGN TCLPHVVGGY EKLMSSDGSV TRQQGRDGGG SDGEREARVL RYKEKRRTRL 120
121 FSKKIRYEVR KLNAEQRPRI KGRFVKRTSL LT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
