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Protein Overview: COL7_ARATH

General Information:
Name(s) found: COL7_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: regulation of transcription [TAS]
    Molecular Function: zinc ion binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVDVESRTA SVTGEKMAAR GCDACMKRSR ASWYCPADDA FLCQSCDASI HSANHLAKRH  60
   61 ERVRLQSSSP TETADKTTSV WYEGFRRKAR TPRSKSCAFE KLLQIESNDP LVPELGGDED 120
  121 DGFFSFSSVE ETEESLNCCV PVFDPFSDML IDDINGFCLV PDEVNNTTTN GELGEVEKAI 180
  181 MDDEGFMGFV PLDMDLEDLT MDVESLLEEE QLCLGFKEPN DVGVIKEENK VGFEINCKDL 240
  241 KRVKDEDEEE EEAKCENGGS KDSDREASND KDRKTSLFLR LDYGAVISAW DNHGSPWKTG 300
  301 IKPECMLGGN TCLPHVVGGY EKLMSSDGSV TRQQGRDGGG SDGEREARVL RYKEKRRTRL 360
  361 FSKKIRYEVR KLNAEQRPRI KGRFVKRTSL LT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] FFAS03 1.09 No description for 2dfyX was found.
    2 View Details [118..240] deduced N/A No confident structure predictions are available.
    3 View Details [241..392] MSA 21.162991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle