| Protein: | PUB20_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 431 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB20_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
202.0 | [0..2] | [425..65] |
|
Region A: Residues: [1-431] |
1 11 21 31 41 51
| | | | | |
1 MGLSLRVRRR GGSVSKKEII PVTSCSEEVE ITIPSQFQCP ISYELMKDPV IIASGITYDR 60
61 ENIEKWFESG YQTCPVTNTV LTSLEQIPNH TIRRMIQGWC GSSLGGGIER IPTPRVPVTS 120
121 HQVSEICERL SAATRRGDYA ACMEMVTKMT RLGKESERNR KCVKENGAGL VLCVCFDAFS 180
181 ENANASLLLE ETVSVLTWML PIGLEGQSKL TTTSSFNRLV ELLRNGDQNA AFLIKELLEL 240
241 NVTHVHALTK INGVQEAFMK SINRDSTCVN SLISIHHMIL TNQETVSRFL ELDLVNITVE 300
301 MLVDSENSVC EKALTVLNVI CETKEGREKV RRNKLVIPIL VKKILKISEK KDLVSVMWKV 360
361 CKSGDGSEVE EALRLGAFKK LVVMLQVGCG EGTKEKVTEL LKMMNKVMKM NGFVDRSYSS 420
421 SIEFKHVKKP F
|
| Detection Method: |  |
| Confidence: | 44.30103 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.373576425899935 | bayes_pls_golite062009 |
