| Protein: | gi|39545884, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 503 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39545884, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
263.0 | [0..1] | [497..1] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MKCPYCSSAQ GRCTTTSSGR SITECSSCGR VMEERQTQNH HLFHLRAQDT PLCLVTSDLQ 60
61 TAAQPSPEDE EDPFEPTGFI TAFSTWSLEP SPIFARSSLS FS
|
| Detection Method: |  |
| Confidence: | 12.30103 |
| Match: | 1rlyA |
| Description: | RDC-derived models of the zinc ribbon domain of human general transcription TFIIB (zinc bound structures) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [103-339] |
1 11 21 31 41 51
| | | | | |
1 GHLAELERTL ELASSTSNSN SSTVVVDNLR AYMQIIDVAS ILGLDCDISE HAFQLFRDCC 60
61 SATCLRNRSV EALATACLVQ AIREAQEPRT LQEISIAANV QQKEIGKYIK ILGEALQLSQ 120
121 PINSNSISVH MPRFCTLLQL NKSAQELATH IGEVVINKCF CTRRNPISIS AAAIYLACQL 180
181 EDKRKTQAEI CKITGLTEVT LRKVYKELLE NWDDLLPSNY TPAVPPEKAF PTTTIST
|
| Detection Method: | |
| Confidence: | 35.69897 |
| Match: | 1c9bA |
| Description: | Transcription factor IIB (TFIIB), core domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [340-503] |
1 11 21 31 41 51
| | | | | |
1 TRSTTPRAVD PPEPSFVEKD KPSAKPIETF DHTYQQPKGK EDKQPKFRQP WLFGTASVMN 60
61 PAEMISEPAK PNAMDYEKQQ LDKQQQQQLG DKETLPIYLR DHNPFPSNPS PSTGISTINW 120
121 SFRPSVVPGS SSNLPVIHPP KLPPGYAEIR GSGSRNADNP HGDF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
