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View Structure Prediction Details

Protein: FKB19_ARATH
Organism: Arabidopsis thaliana
Length: 256 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FKB19_ARATH.

Description E-value Query
Range
Subject
Range
gi|52841028, gi|... - gi|52841028|ref|YP_094827.1| macrophage infectivity potentiator (Mip) [Legionella pneumophila subsp....
182.0 [0..1] [256..7]

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Predicted Domain #1
Region A:
Residues: [1-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASISSFGCF PQSTALAGTS STTRCRTTVA ARLADQSDDF APLRSSGGNC GCVNNSGEFD  60
   61 RRKLLVSSVG LLIGALSYDS KDGDFASASQ FADMPALKGK DYGKTKMKYP DYTETQSGLQ 120
  121 YKDLRVGTGP IAKKGDKVVV DWDGYTIGYY GRIFEARNKT KGGSFEGDDK EFFKFTLGSN 180
  181 EVIPAFEEAV SGMALGGIRR IIVPPELGYP DNDYNKSGPR PMTFSGQRAL DFVLRNQGLI 240
  241 DKTLLFDVEL LKIVPN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.0
Match: 1fd9A
Description: Macrophage infectivity potentiator protein (MIP)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidyl-prolyl cis-trans isomerase activity 4.4182664267098 bayes_pls_golite062009
cis-trans isomerase activity 4.33661522951196 bayes_pls_golite062009
isomerase activity 2.83057106437196 bayes_pls_golite062009
macrolide binding 1.34183721806994 bayes_pls_golite062009
catalytic activity 1.25572252987503 bayes_pls_golite062009
FK506 binding 1.11705415888427 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle