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View Structure Prediction Details

Protein: gi|15241554, gi|...
Organism: Arabidopsis thaliana
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15241554, gi|....

Description E-value Query
Range
Subject
Range
gi|21592537 - gi|21592537|gb|AAM64486.1| unknown [Arabidopsis thaliana]
488.0 [0..1] [353..1]

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Predicted Domain #1
Region A:
Residues: [1-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSSKLKNLT QENISQINGR PVLQPKSNQV PTLDRRNSLK KSPPKPLNPI ASKIPSPRPI  60
   61 SLISPPLSPN TKSLRKPAGS CKELLRSSST KSKPVISPEN SDGGYKEVMP MVIVQKQPGS 120
  121 IAAARREEVA MKQEERKKKI SHYGRIKSVK SNEKNLNVEH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [161-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKKKRCSFIT TSSDPIYVAY HDKEWGVPVH DDNLLFELLV LTGAQVGSDW TSVLKRRNTF  60
   61 REAFSGFEAE LVADFNEKKI QSIVNDYGIN LSQVLAVVDN AKQILKVKRD LGSFNKYIWG 120
  121 FMKHKPVTTK YTSCQKIPVK TSKSETISKD MVRRGFRFVG PTVIHSLMQA AGLTNDHLIT 180
  181 CPRHLECTAM AAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.522879
Match: 2ofiA
Description: No description for 2ofiA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle