YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DPYS_ARATH
Organism: Arabidopsis thaliana
Length: 531 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DPYS_ARATH.

Description E-value Query
Range
Subject
Range
gi|99037618, gi|... - gi|99081338|ref|YP_613492.1| dihydropyrimidinase [Silicibacter sp. TM1040], gi|99037618|gb|ABF64230....
386.0 [0..45] [531..1]

Back

Predicted Domain #1
Region A:
Residues: [1-531]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALDAFFFIV SLFLLFPSPS ASESTTQFCS AGRENGVGSC GVSSTRILIK GGTVVNAHHQ  60
   61 ELADVYVENG IIVAVQPNIK VGDEVTVLDA TGKFVMPGGI DPHTHLAMEF MGTETIDDFF 120
  121 SGQAAALAGG TTMHIDFVIP VNGNLVAGFE AYENKSRESC MDYGFHMAIT KWDEGVSRDM 180
  181 EMLVKEKGIN SFKFFLAYKG SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM 240
  241 IELGITGPEG HALSRPPVLE GEATARAIRL ARFINTPLYV VHVMSVDAMD EIAKARKSGQ 300
  301 KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH 360
  361 CTFNSTQKAL GLDDFRRIPN GVNGLEERMH LIWDTMVESG QLSATDYVRI TSTECARIFN 420
  421 IYPRKGAILA GSDADIIILN PNSSYEISSK SHHSRSDTNV YEGRRGKGKV EVTIAGGRIV 480
  481 WENEELKVVP RSGKYIEMPP FSYLFDGIEK SDANYLSSLR APVKRVRTEA T

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.221849
Match: 2ftwA
Description: No description for 2ftwA was found.

Predicted functions:

Term Confidence Notes
uracil binding 2.6045173443981 bayes_pls_golite062009
pyrimidine binding 2.6045173443981 bayes_pls_golite062009
allantoinase activity 2.45571277189844 bayes_pls_golite062009
dihydroorotase activity 2.32070383330692 bayes_pls_golite062009
dihydropyrimidinase activity 2.27856136692645 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides 2.20489529944693 bayes_pls_golite062009
hydrolase activity 2.17584977880576 bayes_pls_golite062009
deaminase activity 1.79186203771221 bayes_pls_golite062009
catalytic activity 1.70199291046899 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.60895003474033 bayes_pls_golite062009
adenine deaminase activity 1.4081199504179 bayes_pls_golite062009
thymine binding 1.34528530211689 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0.573107361273483 bayes_pls_golite062009
binding 0.420164638111423 bayes_pls_golite062009
guanine deaminase activity 0.134430884998957 bayes_pls_golite062009
protein binding 0.0854348074331311 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle