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View Structure Prediction Details

Protein: ICE1_ARATH
Organism: Arabidopsis thaliana
Length: 494 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ICE1_ARATH.

Description E-value Query
Range
Subject
Range
gi|45934582 - gi|45934582|gb|AAS79350.1| inducer of CBF expression 1 protein [Capsella bursa-pastoris]
248.0 [0..1] [494..1]
gi|46254701 - gi|46254701|gb|AAS86283.1| myc-like anthocyanin regulatory protein [Cornus unalaschkensis]
230.0 [0..109] [490..251]
gi|46254721 - gi|46254721|gb|AAS86293.1| myc-like anthocyanin regulatory protein [Cornus cf. canadensis Xiang and ...
229.0 [0..109] [490..251]
gi|46254689 - gi|46254689|gb|AAS86277.1| myc-like anthocyanin regulatory protein [Cornus cf. canadensis Xiang and ...
229.0 [0..109] [490..246]
gi|46254669 - gi|46254669|gb|AAS86267.1| myc-like anthocyanin regulatory protein [Cornus canadensis]
229.0 [0..109] [490..246]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLDGNNGGG VWLNGGGGER EENEEGSWGR NQEDGSSQFK PMLEGDWFSS NQPHPQDLQM  60
   61 LQNQPDFRYF GGFPFNPNDN LLLQHSIDSS SSCSPSQAFS LDPSQQNQFL STNNNKGCLL 120
  121 NVPSSANPFD NAFEFGSESG FLNQIHAPIS MGFGSLTQLG NRDLSSVPDF LSARSLLAPE 180
  181 S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [182-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNNNTMLCGG FTAPLELEGF GSPANGGFVG NRAKVLKPLE VLASSGAQPT LFQKRAAMRQ  60
   61 SSGSKMGNSE SSGMRRFSDD GDMDETGIEV SGLNYESDEI NESGKAAESV QIGGGG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.292 a.1.1 Globin-like
View Download 0.233 a.1.1 Globin-like
View Download 0.233 a.1.1 Globin-like
View Download 0.207 a.24.18 Description not found.
View Download 0.205 f.1.4 Bcl-2 inhibitors of programmed cell death

Predicted Domain #3
Region A:
Residues: [298-406]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGKKKGMPAK NLMAERRRRK KLNDRLYMLR SVVPKISKMD RASILGDAID YLKELLQRIN  60
   61 DLHNELESTP PGSLPPTSSS FHPLTPTPQT LSCRVKEELC PSSLPSPKG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.522879
Match: 1nkpA
Description: Myc prot-oncogene protein
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [407-494]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQARVEVRLR EGRAVNIHMF CGRRPGLLLA TMKALDNLGL DVQQAVISCF NGFALDVFRA  60
   61 EQCQEGQEIL PDQIKAVLFD TAGYAGMI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.66
Match: 1zpvA
Description: ACT domain protein from Streptococcus pneumoniae
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle