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Protein Overview: ICE1_ARATH

General Information:
Name(s) found: ICE1_ARATH [Swiss-Prot]
Description(s) found:
Found 23 descriptions.
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  • Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 494 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: response to cold [IEP]
    stomatal lineage progression [IMP]
    positive regulation of transcription [IDA]
    response to freezing [IMP]
    Molecular Function: DNA binding [IDA][ISS][TAS]
    transcription factor activity [ISS]
    transcription activator activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLDGNNGGG VWLNGGGGER EENEEGSWGR NQEDGSSQFK PMLEGDWFSS NQPHPQDLQM  60
   61 LQNQPDFRYF GGFPFNPNDN LLLQHSIDSS SSCSPSQAFS LDPSQQNQFL STNNNKGCLL 120
  121 NVPSSANPFD NAFEFGSESG FLNQIHAPIS MGFGSLTQLG NRDLSSVPDF LSARSLLAPE 180
  181 SNNNNTMLCG GFTAPLELEG FGSPANGGFV GNRAKVLKPL EVLASSGAQP TLFQKRAAMR 240
  241 QSSGSKMGNS ESSGMRRFSD DGDMDETGIE VSGLNYESDE INESGKAAES VQIGGGGKGK 300
  301 KKGMPAKNLM AERRRRKKLN DRLYMLRSVV PKISKMDRAS ILGDAIDYLK ELLQRINDLH 360
  361 NELESTPPGS LPPTSSSFHP LTPTPQTLSC RVKEELCPSS LPSPKGQQAR VEVRLREGRA 420
  421 VNIHMFCGRR PGLLLATMKA LDNLGLDVQQ AVISCFNGFA LDVFRAEQCQ EGQEILPDQI 480
  481 KAVLFDTAGY AGMI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..181] MSA 5.238996 View MSA. No confident structure predictions are available.
    2 View Details [182..297] deduced N/A No confident structure predictions are available.
    3 View Details [298..406] PSI-BLAST 14.522879 Myc prot-oncogene protein
    4 View Details [407..494] FFAS03 1.66 ACT domain protein from Streptococcus pneumoniae


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle