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View Structure Prediction Details

Protein: ASB1_ARATH
Organism: Arabidopsis thaliana
Length: 276 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASB1_ARATH.

Description E-value Query
Range
Subject
Range
gi|34398183 - gi|34398183|gb|AAQ67181.1| CAD [Iteaphila sp. NCSU-99072186]
235.0 [0..3] [275..39]

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Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASTLYKSC LLQPKSGSTT RRLNPSLVNP LTNPTRVSVL GKSRRDVFAK ASIEMAESNS  60
   61 IPSVVVNSSK Q

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [72-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HGPIIVIDNY DSFTYNLCQY MGELGCHFEV YRNDELTVEE LKKKNPRGVL ISPGPGTPQD  60
   61 SGISLQTVLE LGPLVPLFGV CMGLQCIGEA FGGKIVRSPF GVMHGKSSMV HYDEKGEEGL 120
  121 FSGLSNPFIV GRYHSLVIEK DTFPSDELEV TAWTEDGLVM AARHRKYKHI QGVQFHPESI 180
  181 ITTEGKTIVR NFIKIVEKKE SEKLT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.045757
Match: 1qdlB
Description: Anthranilate synthase GAT subunit, TrpG
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
4-amino-4-deoxychorismate synthase activity 4.48164623771604 bayes_pls_golite062009
anthranilate synthase activity 2.51214170411838 bayes_pls_golite062009
ligase activity 1.77692713123297 bayes_pls_golite062009
oxo-acid-lyase activity 1.35896725827905 bayes_pls_golite062009
catalytic activity 1.30391542469987 bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds 0.628648036096965 bayes_pls_golite062009
imidazoleglycerol-phosphate synthase activity 0.270391651600004 bayes_pls_golite062009
carbon-carbon lyase activity 0.0769356405014503 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle