| Protein: | BAM8_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 689 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BAM8_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1008.0 | [0..1] | [689..1] |
|
|
776.0 | [0..243] | [683..1] |
|
|
775.0 | [0..250] | [684..5] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MHTLNNTITT TTGSQDPNLD PIPDPDQFPN RNRNQPQSRR PRGFAAAAAA ASIAPTENDV 60
61 NNGNIAGIGG GEGSSGGGG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.384 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.355 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.355 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.324 | a.3.1 | Cytochrome c |
| View | Download | 0.286 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.262 | b.34.19 | Description not found. |
| View | Download | 0.230 | a.204.1 | Description not found. |
|
Region A: Residues: [80-238] |
1 11 21 31 41 51
| | | | | |
1 GGGGKGKRER EKEKERTKLR ERHRRAITSR MLAGLRQYGN FPLPARADMN DVIAALAREA 60
61 GWSVEADGTT YRQSQQPNHV VQFPTRSIES PLSSSTLKNC AKAAIESQQH SVLRNDEKLA 120
121 PVSLDSIGIA ESDHPGNGRY TSVSPITSVG CLEANQLIQ
|
| Detection Method: | |
| Confidence: | 86.508638 |
| Match: | PF05687.4 |
| Description: | No description for PF05687.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [239-689] |
1 11 21 31 41 51
| | | | | |
1 DVHSAEQCND FTESFYVPVY AMLPVGIIDN FGQLVDPEGV RQELSYMKSL NVDGVVIDCW 60
61 WGIVEGWNPQ KYVWSGYREL FNLIRDFKLK LQVVMAFHEY GGNASGNVMI SLPQWVLKIG 120
121 KDNPDIFFTD REGRRSFECL NWSIDKERVL HGRTGIEVYF DFMRSFRSEF DDLFVEGLIT 180
181 AVEIGLGASG ELKYPSFPER MGWIYPGIGE FQCYDKYSQL SLQKEAKSRG FTFWGKGPEN 240
241 AGQYSSHPHE TVFFQERGEY DSYYGRFFLN WYSQLLIGHA ENVLSLANLA FEETKIIVKI 300
301 PAIYWSYKTA SHAAELTAGY YNPSNRDGYS LVFETLKKYS VTVKFVCPGP QMSPNAHEEA 360
361 LADPEGLSWQ VINAAWDKGL QIGGENAITC FDRDGCMRLI DIAKPRNHPD GYHFSFFTYR 420
421 QPSPLVQGST CFPDLDYFIK RMHGDIRDKQ F
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1bfnA |
| Description: | BETA-AMYLASE/BETA-CYCLODEXTRIN COMPLEX |
Matching Structure (courtesy of the PDB): |
|
