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Protein Overview: gi|34395244, gi|...

General Information:
Name(s) found: gi|50938173 [NCBI NR]
gi|34395244 [NCBI NR]
gi|125600602 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|50938173|ref|XP_478614.1| putative beta-amylase [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|34395244|dbj|BAC83773.1| putative beta-amylase [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125600602|gb|EAZ40178.1| hypothetical protein OsJ_24623 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGNLLANYV QVNVMLPLDV VTVDNKFEKV DETRAQLKKL TEAGVDGVMV DVWWGLVEGK  60
   61 GPGSYDWEAY KQLFRLVQEA GLKLQAIMSF HQCGGNVGDI VNIPIPQWVR DVGASDPDIF 120
  121 YTNRGGARNI EYLTLGVDDQ PLFHGRTAIQ MYADYMKSFR ENMAEFLDTG VIVDIEVGLG 180
  181 PAGEMRYPSY PQSQGWVFPG IGEFICYDKY LEADFKAEAA KAGHPEWELP DDAGEYNDTP 240
  241 EKTRFFADNG TYVTEKGKFF LTWYSNKLIK HGDKILDEAN KVFLGCRVQL AIKISGIHWW 300
  301 YRVPNHAAEL TAGYYNLDNR DGYRTIARML TRHRACVNFT CAEMRDSEQS SEAKSAPEEL 360
  361 VQQVLSAGWR EGLHVACENA LGRYDATAYN TILRNSRPTG INKNGPPEHK LFGFTYLRLS 420
  421 DELLEGQNYS TFKTFVKRMH ANLDYNSNVD PLEPLQRSMP EMPIGKILQA AHPKLAPFPF 480
  481 DENTDLPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..488] PSI-BLAST 1000.0 BETA-AMYLASE/BETA-CYCLODEXTRIN COMPLEX

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle